RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 IFNA17P01571 189 aa7.29□□□□□ -1.24
ACTN1-210ENST00000553779 HOXA1P49639 335 aaPredicted RBP7.29□□□□□ -1.24
ACTN1-210ENST00000553779 PRCDQ00LT1 54 aa7.29□□□□□ -1.24
ACTN1-210ENST00000553779 SPINK9Q5DT21 86 aa7.29□□□□□ -1.24
ACTN1-210ENST00000553779 LEMD1Q68G75 181 aa7.29□□□□□ -1.24
ACTN1-210ENST00000553779 DHRS11Q6UWP2 260 aa7.29□□□□□ -1.24
ACTN1-210ENST00000553779 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
ACTN1-210ENST00000553779 STXBP6Q8NFX7 210 aa7.29□□□□□ -1.24
ACTN1-210ENST00000553779 RBPMSQ93062 196 aaKnown RBP7.29□□□□□ -1.24
ACTN1-210ENST00000553779 MRGPRFQ96AM1 343 aa7.29□□□□□ -1.24
ACTN1-210ENST00000553779 NAP1L6A6NFF2 107 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 IGLL5B9A064 214 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 F8W735 103 aaPredicted RBP7.28□□□□□ -1.24
ACTN1-210ENST00000553779 ATG12O94817 140 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 SUB1P53999 127 aaKnown RBP eCLIP7.28□□□□□ -1.24
ACTN1-210ENST00000553779 DEFB131AP59861 70 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 IL18Q14116 193 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 COMMD7Q86VX2 200 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 ST8SIA2Q92186 375 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 GRAMD2BQ96HH9 432 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 OR10C1Q96KK4 312 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 METTL26Q96S19 204 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 MS4A6AQ9H2W1 248 aa7.28□□□□□ -1.24
ACTN1-210ENST00000553779 PUS1Q9Y606 427 aaKnown RBP eCLIP7.28□□□□□ -1.24
ACTN1-210ENST00000553779 A0A1W2PS18 150 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 DBX1A6NMT0 343 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 I3L2K1 104 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 CORTO00230 105 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 DFFBO76075 338 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 OPRK1P41145 380 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 TCTAP57738 103 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 HSPE1P61604 102 aaKnown RBP7.27□□□□□ -1.25
ACTN1-210ENST00000553779 B2MP61769 119 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 DHODHQ02127 395 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 RNASE12Q5GAN4 147 aaKnown RBP7.27□□□□□ -1.25
ACTN1-210ENST00000553779 TOMM20LQ6UXN7 152 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 ZNF600Q6ZNG1 722 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 ZNF114Q8NC26 417 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 C15orf40Q8WUR7 153 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 TMEM230Q96A57 120 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 FAM212BQ9NTI7 297 aaPredicted RBP7.27□□□□□ -1.25
ACTN1-210ENST00000553779 COMMD3Q9UBI1 195 aa7.27□□□□□ -1.25
ACTN1-210ENST00000553779 MUC4Q99102 2169 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 C11orf94C9JXX5 98 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 CTDSPLO15194 276 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 SULT1A3P0DMM9 295 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 SULT1A4P0DMN0 295 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 NPPCP23582 126 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 NUP62P37198 522 aaPredicted RBP7.26□□□□□ -1.25
ACTN1-210ENST00000553779 FLI1Q01543 452 aaPredicted RBP7.26□□□□□ -1.25
ACTN1-210ENST00000553779 PXDC1Q5TGL8 231 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 SEC22AQ96IW7 307 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 SCPEP1Q9HB40 452 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 PFDN2Q9UHV9 154 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 ANAPC10Q9UM13 185 aa7.26□□□□□ -1.25
ACTN1-210ENST00000553779 LINC00854A0A1B0GVQ3 168 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 RPS10-NUDT3A0A1W2PQS6 291 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 M0QYG6 137 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 GSTZ1O43708 216 aaPredicted RBP7.25□□□□□ -1.25
ACTN1-210ENST00000553779 ZNF688P0C7X2 276 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 SPP1P10451 314 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 AP3S2P59780 193 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 TMEM41BQ5BJD5 291 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 MORN3Q6PF18 240 aaPredicted RBP7.25□□□□□ -1.25
ACTN1-210ENST00000553779 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 CCDC71LQ8N9Z2 235 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
ACTN1-210ENST00000553779 ZNF414Q96IQ9 312 aa7.25□□□□□ -1.25
ACTN1-210ENST00000553779 DNAH6Q9C0G6 4158 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 TRAV2A0A0B4J234 112 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 TRAV10A0A0B4J240 114 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 IGHV4-28A0A0C4DH34 117 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 HMSDA8MTL9 139 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 HPGDSO60760 199 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 APOHP02749 345 aaPredicted RBP7.24□□□□□ -1.25
ACTN1-210ENST00000553779 TCRBP04435 133 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 H2AFB2P0C5Z0 115 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 MIFP14174 115 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 PI3P19957 117 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 P2RY1P47900 373 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 PIGPP57054 158 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 RAP2BP61225 183 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 DHRS2Q13268 280 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 FCN2Q15485 313 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 IZUMO4Q1ZYL8 232 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 LGALSLQ3ZCW2 172 aaPredicted RBP7.24□□□□□ -1.25
ACTN1-210ENST00000553779 RNASE10Q5GAN6 216 aaKnown RBP7.24□□□□□ -1.25
ACTN1-210ENST00000553779 ACTL10Q5JWF8 245 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 FAM90A2PQ658T7 463 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 VSIRQ9H7M9 311 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 HECTD4Q9Y4D8 3996 aa7.24□□□□□ -1.25
ACTN1-210ENST00000553779 HELTA6NFD8 242 aa7.23□□□□□ -1.25
ACTN1-210ENST00000553779 KNCNA6PVL3 124 aa7.23□□□□□ -1.25
ACTN1-210ENST00000553779 SNRPGP15A8MWD9 76 aa7.23□□□□□ -1.25
ACTN1-210ENST00000553779 TSC22D2O75157 780 aa7.23□□□□□ -1.25
ACTN1-210ENST00000553779 B3GALNT1O75752 331 aa7.23□□□□□ -1.25
ACTN1-210ENST00000553779 IGKV1-39P01597 117 aa7.23□□□□□ -1.25
ACTN1-210ENST00000553779 IGKV1D-39P04432 117 aa7.23□□□□□ -1.25
ACTN1-210ENST00000553779 GIPP09681 153 aaPredicted RBP7.23□□□□□ -1.25
ACTN1-210ENST00000553779 HLA-DMBP28068 263 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms