RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PARP11Q9NR21 331 aa1.62□□□□□ -2.15
CPSF6-207ENST00000551516 SLC2A9Q9NRM0 540 aa1.62□□□□□ -2.15
CPSF6-207ENST00000551516 ARL2BPQ9Y2Y0 163 aa1.62□□□□□ -2.15
CPSF6-207ENST00000551516 LSM2Q9Y333 95 aaKnown RBP1.62□□□□□ -2.15
CPSF6-207ENST00000551516 RPL36Q9Y3U8 105 aaKnown RBP1.62□□□□□ -2.15
CPSF6-207ENST00000551516 TRBV6-7A0A0A0MS04 114 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 IGKV1D-13A0A0B4J2D9 117 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 IGLC7A0M8Q6 106 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 NUPR2A6NF83 97 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 OR5H14A6NHG9 310 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 PPP5D1E7EU14 171 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 AIPO00170 330 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 RAB29O14966 203 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 SOCS1O15524 211 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 AIREO43918 545 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 OR7C1O76099 320 aaPredicted RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 IGHV3-23P01764 117 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 TRGV3P03979 118 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 IGKV1-13P0DP09 117 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 GTF2F2P13984 249 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 MGMTP16455 207 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 BMI1P35226 326 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF93P35789 620 aaPredicted RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 TAGLN2P37802 199 aaKnown RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 LGALS7P47929 136 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 SEC61GP60059 68 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 UBE2KP61086 200 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 ACTR3P61158 418 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 ARFRP1Q13795 201 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 POU2AF1Q16633 256 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 C12orf74Q32Q52 190 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 KCTD21Q4G0X4 260 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 C6orf226Q5I0X4 101 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 C1orf146Q5VVC0 180 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 LPCAT4Q643R3 524 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 LCN12Q6JVE5 192 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 RPL22L1Q6P5R6 122 aaKnown RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 UNQ5815/PRO19632Q6UWF5 114 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 GLIPR1L1Q6UWM5 242 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 Q6ZRN7 208 aaPredicted RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 C6orf201Q7Z4U5 140 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 PDPNQ86YL7 162 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 SGPP2Q8IWX5 399 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 H1FOOQ8IZA3 346 aaPredicted RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 FAM24BQ8N5W8 94 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 LINC00612Q8N6U2 182 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF502Q8TBZ5 544 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 DYDC1Q8WWB3 177 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 UFD1Q92890 307 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 SMIM19Q96E16 107 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 CENPNQ96H22 339 aaPredicted RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 OR4C12Q96R67 309 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 HIST1H4GQ99525 98 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 THTPAQ9BU02 230 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 CHRDL1Q9BU40 450 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 RNF126Q9BV68 326 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 GGTLC1Q9BX51 225 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 CST11Q9H112 138 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 METTL9Q9H1A3 318 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 BANF2Q9H503 90 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF430Q9H8G1 570 aaPredicted RBP1.61□□□□□ -2.15
CPSF6-207ENST00000551516 SDHAF2Q9NX18 166 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 BABAM2Q9NXR7 383 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 SLC2A8Q9NY64 477 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 GNG8Q9UK08 70 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 PEX16Q9Y5Y5 336 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 V9GY05 133 aa1.61□□□□□ -2.15
CPSF6-207ENST00000551516 TRAV3A0A0B4J244 114 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 TRAV25A0A0B4J276 109 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 A0A0G2JLM5 398 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 DAPL1A0PJW8 107 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 PLAC8L1A1L4L8 177 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 XKRY2A2RUG3 117 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 FAM223BA6NKX1 122 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 ZFP92A6NM28 416 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 A8MTW9 85 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 G3V2T6 193 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 J3QLW9 94 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 K7EIM0 57 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 MFNGO00587 321 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF780AO75290 641 aaPredicted RBP1.6□□□□□ -2.15
CPSF6-207ENST00000551516 CIB2O75838 187 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 CNIH1O95406 144 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 FAM107AO95990 144 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 HLA-DQB1P01920 261 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 MAS1P04201 325 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 CTSGP08311 255 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 HTR1AP08908 422 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 UCHL1P09936 223 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 SAA1P0DJI8 122 aaPredicted RBP1.6□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF19P17023 458 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 CELP19835 753 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 RAB3AP20336 220 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 GALP22466 123 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 ZBTB25P24278 435 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 TCTAP57738 103 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 TPPP2P59282 170 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 OR2B8PP59922 312 aa1.6□□□□□ -2.15
CPSF6-207ENST00000551516 SELENOTP62341 195 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms