RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 OR4B1Q8NGF8 309 aa7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 SEC22AQ96IW7 307 aa7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 C7orf50Q9BRJ6 194 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 NRN1Q9NPD7 142 aa7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 RHBDL2Q9NX52 303 aa7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 EHFQ9NZC4 300 aa7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 GOLT1BQ9Y3E0 138 aa7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 MYCBP2O75592 4640 aa7.56□□□□□ -1.2
TRAFD1-206ENST00000549358 CORTO00230 105 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 SCGB2A1O75556 95 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 IGKV1-17P01599 117 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 HNRNPCP07910 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 OPRK1P41145 380 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 NKX2-1P43699 371 aaPredicted RBP7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 IZUMO4Q1ZYL8 232 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 RRN3P1Q2M238 152 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 PHLDA2Q53GA4 152 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 ZNF709Q8N972 641 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 OR4X1Q8NH49 305 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 FRZBQ92765 325 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 LINC00052Q96N35 136 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 C18orf15Q96N68 181 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 SLC35B3Q9H1N7 401 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 FNDC4Q9H6D8 234 aaPredicted RBP7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 Q9H8V8 135 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 NDUFB11Q9NX14 153 aa7.55□□□□□ -1.2
TRAFD1-206ENST00000549358 TRAV30A0A087WSZ9 112 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 F5H768 121 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 GPR31O00270 319 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 IGKV1-39P01597 117 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 PMP2P02689 132 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 IGKV1D-39P04432 117 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 DEFB130BP0DP73 79 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 DEFB130AP0DP74 79 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 BTF3P20290 206 aaKnown RBP7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 ALDH3B2P48448 385 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 SUB1P53999 127 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 XGP55808 180 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 SIGLEC15Q6ZMC9 328 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 SSX7Q7RTT5 188 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 PRSS48Q7RTY5 328 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 Q8WTZ3 238 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 MRGPRFQ96AM1 343 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 KRTAP9-2Q9BYQ4 174 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 KRTAP1-5Q9BYS1 174 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 SAV1Q9H4B6 383 aaPredicted RBP7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 AUNIPQ9H7T9 357 aa7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 RRP15Q9Y3B9 282 aaKnown RBP7.54□□□□□ -1.2
TRAFD1-206ENST00000549358 BUB3O43684 328 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 PRM2P04554 102 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 H2AFB1P0C5Y9 115 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 H2AFB2P0C5Z0 115 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 RNASE2P10153 161 aaKnown RBP7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 FUSP35637 526 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 ETV6P41212 452 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 CBX5P45973 191 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 DHODHQ02127 395 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 CLINT1Q14677 625 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 USF2Q15853 346 aaPredicted RBP7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 TBC1D26Q86UD7 250 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 SLC35G3Q8N808 338 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 OR5H6Q8NGV6 325 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 SLC25A38Q96DW6 304 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 TMEM208Q9BTX3 173 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 MAGT1Q9H0U3 335 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 IFT46Q9NQC8 304 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 FAT1Q14517 4588 aa7.53□□□□□ -1.2
TRAFD1-206ENST00000549358 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 INS-IGF2F8WCM5 200 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 M0QYG6 137 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 IL4P05112 153 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 PSG9Q00887 426 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 FCN2Q15485 313 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 TTC32Q5I0X7 151 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 SFXN4Q6P4A7 337 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 FOXI2Q6ZQN5 318 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 OR6F1Q8NGZ6 308 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 UHRF2Q96PU4 802 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 FXYD6Q9H0Q3 95 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 DIABLOQ9NR28 239 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 FAM212BQ9NTI7 297 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 PTTG2Q9NZH5 202 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
TRAFD1-206ENST00000549358 A0A0A6YYH2 397 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 A0A0B4J293 547 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 A6NJ64 397 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 F6UB75 175 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 IGLC1P0CG04 106 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 S100GP29377 79 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 RPL5P46777 297 aaKnown RBP7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 RORCP51449 518 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 ZNF79Q15937 498 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 FAM78BQ5VT40 261 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 OR5H2Q8NGV7 314 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
TRAFD1-206ENST00000549358 WDR12Q9GZL7 423 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms