RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 SMCO4Q9NRQ5 59 aa6.46□□□□□ -1.38
CCDC65-203ENST00000547861 DPM3Q9P2X0 92 aa6.46□□□□□ -1.38
CCDC65-203ENST00000547861 METTL1Q9UBP6 276 aaKnown RBP6.46□□□□□ -1.38
CCDC65-203ENST00000547861 SLC45A2Q9UMX9 530 aa6.46□□□□□ -1.38
CCDC65-203ENST00000547861 IGHV2-70DA0A0C4DH43 119 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 A0A1W2PPV4 95 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 A0A1W2PRD5 423 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 A0A1W2PRF3 423 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 A0A1W2PRM7 423 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 LINC00869P0C866 280 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 STAG3L2P0CL84 134 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 ARL14EPLP0DKL9 152 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 PAX6P26367 422 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 OR10J1P30954 320 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 MAS1LP35410 378 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 PSMB3P49720 205 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 LCN2P80188 198 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 SSBP2P81877 361 aaPredicted RBP6.45□□□□□ -1.38
CCDC65-203ENST00000547861 RAB31Q13636 194 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 MLANAQ16655 118 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 TMEM249Q2WGJ8 235 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 SPATA31B1PQ5VZV4 182 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 ZNF114Q8NC26 417 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 RNASEH2CQ8TDP1 164 aaKnown RBP6.45□□□□□ -1.38
CCDC65-203ENST00000547861 TVP23CQ96ET8 276 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 C12orf57Q99622 126 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 NIPSNAP3BQ9BS92 247 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 FBXL15Q9H469 300 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 FNDC4Q9H6D8 234 aaPredicted RBP6.45□□□□□ -1.38
CCDC65-203ENST00000547861 CR1P17927 2039 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 ADARB2-AS1A8MUL3 147 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 TEX22C9J3V5 150 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 PAGE4O60829 102 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 FABP1P07148 127 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 AREGP15514 252 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 GPX4P36969 197 aaPredicted RBP6.45□□□□□ -1.38
CCDC65-203ENST00000547861 CEACAM3P40198 252 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 SUB1P53999 127 aaKnown RBP eCLIP6.45□□□□□ -1.38
CCDC65-203ENST00000547861 LMO4P61968 165 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 RHOBP62745 196 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 GNB1P62873 340 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 KRTAP1-1Q07627 177 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 CLEC12BQ2HXU8 276 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 FBLN7Q53RD9 439 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 C19orf35Q6ZS72 473 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 SLC35E3Q7Z769 313 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 PPP1R27Q86WC6 154 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 MRPL41Q8IXM3 137 aaKnown RBP6.45□□□□□ -1.38
CCDC65-203ENST00000547861 OR5T1Q8NG75 326 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 ABHD5Q8WTS1 349 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 CACNG8Q8WXS5 425 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 RNF5Q99942 180 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 HILPDAQ9Y5L2 63 aa6.45□□□□□ -1.38
CCDC65-203ENST00000547861 SVEP1Q4LDE5 3571 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 A0A0U1RQK1 487 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 ZNF320A2RRD8 509 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 COLCA2A8K830 154 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 TMEM250H0YL14 139 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 CRLF1O75462 422 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 ACTL6BO94805 426 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 CXorf1O96002 111 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 PDLIM4P50479 330 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 MFAP2P55001 183 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 UBE2G2P60604 165 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 MMDQ15546 238 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 PVRIGQ6DKI7 326 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 DYNAPQ8N1N2 210 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 C15orf54Q8N8G6 183 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 OR4F5Q8NH21 305 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 OR2T6Q8NHC8 308 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 ISOC2Q96AB3 205 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 ACY3Q96HD9 319 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 OR4F4Q96R69 305 aa6.44□□□□□ -1.38
CCDC65-203ENST00000547861 MRPL36Q9P0J6 103 aaKnown RBP6.44□□□□□ -1.38
CCDC65-203ENST00000547861 A0A087WWC5 75 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 C11orf94C9JXX5 98 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 NBR2O15453 112 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 NDUFA3O95167 84 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 APELAP0DMC3 54 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 GATA2P23769 480 aaPredicted RBP6.43□□□□□ -1.38
CCDC65-203ENST00000547861 GCHFRP30047 84 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 ATP5G3P48201 142 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 FLI1Q01543 452 aaPredicted RBP6.43□□□□□ -1.38
CCDC65-203ENST00000547861 PLGLAQ15195 96 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 SSX2Q16385 188 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 CYP2G1PQ6ZSU1 146 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 MIR17HGQ75NE6 70 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 THAP8Q8NA92 274 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 SRSF12Q8WXF0 261 aaKnown RBP6.43□□□□□ -1.38
CCDC65-203ENST00000547861 HIST1H2BAQ96A08 127 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 MISP3Q96FF7 219 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 TBX15Q96SF7 602 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 SMIM7Q9BQ49 75 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 PARLQ9H300 379 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 SEPSECSQ9HD40 501 aaKnown RBP6.43□□□□□ -1.38
CCDC65-203ENST00000547861 FUT9Q9Y231 359 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
CCDC65-203ENST00000547861 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.42□□□□□ -1.38
CCDC65-203ENST00000547861 IGKV1D-37A0A075B6S9 117 aa6.42□□□□□ -1.38
CCDC65-203ENST00000547861 PSMB11A5LHX3 300 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms