RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RBPMS2Q6ZRY4 209 aaKnown RBP5.56□□□□□ -1.52
CPSF7-224ENST00000544990 LYZL2Q7Z4W2 148 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 CENPSQ8N2Z9 138 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 CACNG8Q8WXS5 425 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM190Q8WZ59 177 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 ASCL2Q99929 193 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 C7orf50Q9BRJ6 194 aaKnown RBP5.56□□□□□ -1.52
CPSF7-224ENST00000544990 CHRDL1Q9BU40 450 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 C20orf24Q9BUV8 137 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 TUBA4BQ9H853 241 aa5.56□□□□□ -1.52
CPSF7-224ENST00000544990 DAZ1Q9NQZ3 744 aaKnown RBP5.56□□□□□ -1.52
CPSF7-224ENST00000544990 PRKDCP78527 4128 aaKnown RBP5.55□□□□□ -1.52
CPSF7-224ENST00000544990 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 TRAV30A0A087WSZ9 112 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 A0A1B0GU03 582 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 C15orf62A8K5M9 175 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 SFT2D2O95562 160 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 IGHV3-48P01763 117 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 EDN2P20800 178 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 CD81P60033 236 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 CNPY1Q3B7I2 92 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 BSXQ3C1V8 233 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 C2orf83Q53S99 150 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 PVRIGQ6DKI7 326 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 ETFRF1Q6IPR1 90 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 C11orf87Q6NUJ2 197 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 BTNL8Q6UX41 500 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 SLC16A13Q7RTY0 426 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 SBSPONQ8IVN8 264 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 LRTM2Q8N967 370 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 SLC24A4Q8NFF2 622 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 OR1S1Q8NH92 325 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 NEU1Q99519 415 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 NEURL2Q9BR09 285 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 GINS3Q9BRX5 216 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 MLXQ9UH92 298 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 U3KQK5 164 aa5.55□□□□□ -1.52
CPSF7-224ENST00000544990 TRAV14DV4A0A0A6YYC5 116 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 LINC00854A0A1B0GVQ3 168 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 CLN5O75503 358 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 MED6O75586 246 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 NDUFB6O95139 128 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 NXPH3O95157 252 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM50AO95807 157 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 IFNA10P01566 189 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 SLC25A4P12235 298 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 SLC25A6P12236 298 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 IL7P13232 177 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 NPY1RP25929 384 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 BMI1P35226 326 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 ATP5IP56385 69 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-224ENST00000544990 TNFRSF9Q07011 255 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 PPP1R1AQ13522 171 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 NMSQ5H8A3 153 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 ZNF600Q6ZNG1 722 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 LINC00299Q6ZSB3 139 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM61Q8N0U2 210 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 OR52B4Q8NGK2 314 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 OR4X1Q8NH49 305 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 RNASEH2CQ8TDP1 164 aaKnown RBP5.54□□□□□ -1.52
CPSF7-224ENST00000544990 DTD1Q8TEA8 209 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 OR10C1Q96KK4 312 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 WWC2-AS2Q96NR7 200 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 SDHCQ99643 169 aaPredicted RBP5.54□□□□□ -1.52
CPSF7-224ENST00000544990 HSPB7Q9UBY9 170 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 TMED3Q9Y3Q3 217 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 U3KQ87 197 aa5.54□□□□□ -1.52
CPSF7-224ENST00000544990 TRGV11A0A075B6L2 103 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 IGHV3OR16-8A0A075B7F1 116 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 IGHV7-4-1A0A0J9YVY3 117 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 OR11H12B2RN74 326 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 FAM90A26D6RGX4 464 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 TSPAN4O14817 238 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 ZNF207O43670 478 aaKnown RBP5.53□□□□□ -1.52
CPSF7-224ENST00000544990 CD5P06127 495 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 CD7P09564 240 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM116Q8NCL8 245 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 COQ8AQ8NI60 647 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 S100ZQ8WXG8 99 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 SPAG8Q99932 426 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-224ENST00000544990 CCDC32Q9BV29 185 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 RHPN1-AS1Q9BWJ2 59 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 RBKSQ9H477 322 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 FNDC4Q9H6D8 234 aaPredicted RBP5.53□□□□□ -1.52
CPSF7-224ENST00000544990 TMEM231Q9H6L2 316 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 SMPXQ9UHP9 88 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 PUS1Q9Y606 427 aaKnown RBP eCLIP5.53□□□□□ -1.52
CPSF7-224ENST00000544990 SELENOKQ9Y6D0 94 aa5.53□□□□□ -1.52
CPSF7-224ENST00000544990 A0A1W2PS18 150 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 C9orf170A2RU37 121 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 OR4C46A6NHA9 309 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 CHEK1O14757 476 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 LYRM1O43325 122 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 PITX3O75364 302 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 IFNA21P01568 189 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 IFNA4P05014 189 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 HOXB5P09067 269 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 OR4E1P0C645 316 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 NPPCP23582 126 aa5.52□□□□□ -1.53
CPSF7-224ENST00000544990 CMC4P56277 68 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms