RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR2W1Q9Y3N9 320 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 ORC6Q9Y5N6 252 aa2.81□□□□□ -1.96
SNHG1-220ENST00000544550 F11RQ9Y624 299 aaKnown RBP2.81□□□□□ -1.96
SNHG1-220ENST00000544550 A0A087WTM6 91 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 IGHV3-21A0A0B4J1V1 117 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 IGHV3-66A0A0C4DH42 116 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 A0A1W2PPK0 400 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 TCRBV3S1A0A5B6 114 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 H3BMM0 161 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 K7EIM0 57 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 UPK2O00526 184 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 SOCS1O15524 211 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 RBFOX2O43251 390 aaKnown RBP eCLIP2.8□□□□□ -1.96
SNHG1-220ENST00000544550 HPRT1P00492 218 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 FCGR3AP08637 254 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 CTXN2P0C2S0 81 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 LIMS3P0CW19 117 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 LIMS4P0CW20 117 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 HLA-DRB4P13762 266 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 NQO2P16083 231 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 POLR2IP36954 125 aaKnown RBP2.8□□□□□ -1.96
SNHG1-220ENST00000544550 P2RY1P47900 373 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 NPBWR1P48145 328 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 ST3GAL4Q11206 333 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 UNC119Q13432 240 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 FLOT2Q14254 428 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 P2RY14Q15391 338 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 TMEM69Q5SWH9 247 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 XAF1Q6GPH4 301 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 OR10K2Q6IF99 312 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 TOMM20LQ6UXN7 152 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 Q6ZRN7 208 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-220ENST00000544550 H1FOOQ8IZA3 346 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-220ENST00000544550 FAM89BQ8N5H3 189 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 ZBTB8BQ8NAP8 495 aaPredicted RBP2.8□□□□□ -1.96
SNHG1-220ENST00000544550 OR56B1Q8NGI3 324 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 OR1P1Q8NH06 330 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 MOB3AQ96BX8 217 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 ARHGAP5-AS1Q96IT6 56 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 TMEM56Q96MV1 263 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 DERL3Q96Q80 235 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 PECRQ9BY49 303 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 LPAR5Q9H1C0 372 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 DCSTAMPQ9H295 470 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 ZNF586Q9NXT0 402 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 SPATA2Q9UM82 520 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 MRPS16Q9Y3D3 137 aaKnown RBP2.8□□□□□ -1.96
SNHG1-220ENST00000544550 HLA-DRB4X5D2U9 266 aa2.8□□□□□ -1.96
SNHG1-220ENST00000544550 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 A0A0A6YYD4 124 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 TRAV3A0A0B4J244 114 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 IRGMA1A4Y4 181 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 HLA-DQB1P01920 261 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 C1QBP02746 253 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 APOHP02749 345 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-220ENST00000544550 P0C879 139 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 DEFB130BP0DP73 79 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 DEFB130AP0DP74 79 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 MYL12AP19105 171 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 CALB2P22676 271 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 CRYBB3P26998 211 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 FUSP35637 526 aaKnown RBP eCLIP2.79□□□□□ -1.96
SNHG1-220ENST00000544550 TALDO1P37837 337 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 NKX2-1P43699 371 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-220ENST00000544550 ARPC4P59998 168 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 B2MP61769 119 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 RPS11P62280 158 aaKnown RBP eCLIP2.79□□□□□ -1.96
SNHG1-220ENST00000544550 RPL30P62888 115 aaKnown RBP2.79□□□□□ -1.96
SNHG1-220ENST00000544550 HAMPP81172 84 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 QRFPP83859 136 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 WT1-ASQ06250 92 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 CATR1Q13166 79 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 DHRS2Q13268 280 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 MSMO1Q15800 293 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 POU2AF1Q16633 256 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 ACSM3Q53FZ2 586 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 HSP90B2PQ58FF3 399 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 C1orf100Q5SVJ3 147 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 SPATA31B1PQ5VZV4 182 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 CST9LP1Q5W188 147 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 Q6ZS49 121 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 SPAG16Q8N0X2 631 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 DMBX1Q8NFW5 382 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 OR10W1Q8NGF6 305 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 OR52I1Q8NGK6 324 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 OR4C16Q8NGL9 310 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 OR1L8Q8NGR8 309 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 OR10J6PQ8NGY7 276 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 PHYHIPQ92561 330 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 SLC25A46Q96AG3 418 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 GNPNAT1Q96EK6 184 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-220ENST00000544550 PGLYRP3Q96LB9 341 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 TMEM208Q9BTX3 173 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 FGF20Q9NP95 211 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-220ENST00000544550 NDUFA4L2Q9NRX3 87 aa2.79□□□□□ -1.96
SNHG1-220ENST00000544550 TRAV9-2A0A087WT02 112 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 TEX50A0A1B0GTY4 177 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 FOXI3A8MTJ6 420 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-220ENST00000544550 H3BNG1 76 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 I3L2K1 104 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms