RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 H3BUX3 64 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 SCGB1C2P0DMR2 95 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 HEPN1Q6WQI6 88 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 DPH3Q96FX2 82 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 SMDT1Q9H4I9 107 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 RPUSD1Q9UJJ7 312 aaKnown RBP5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 PTPN13Q12923 2485 aa5.73□□□□□ -1.49
SRGAP1-206ENST00000543397 LY6HO94772 140 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 CCKARP32238 428 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 SGMS2Q8NHU3 365 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 MRAP2Q96G30 205 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 IGHV2-26A0A0B4J1V2 119 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 OOSP1A8MZH6 123 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 DLX1P56177 255 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 ICAM4Q14773 271 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 TAL2Q16559 108 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 MINOS1Q5TGZ0 78 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 C10orf126Q8N4M7 172 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 FAM110DQ8TAY7 271 aaPredicted RBP5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 MINOS1-NBL1R4GNA1 71 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 SHISA3A0PJX4 238 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 OR9G9P0C7N8 305 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 TRGC1P0CF51 173 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 HTN3P15516 51 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 TEX45Q8NA69 505 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 AQP10Q96PS8 301 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 MIEN1Q9BRT3 115 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 GGACTQ9BVM4 153 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 CSTL1Q9H114 145 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 LINC00527Q9UJ94 153 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 DOCK10Q96BY6 2186 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 H3BS24 57 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 UPK2O00526 184 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 RRHO14718 337 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 APCSP02743 223 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 IGHV1-8P0DP01 117 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 GAGE5Q13069 117 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 GAGE6Q13070 117 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF56Q15929 161 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 LDLRAD2Q5SZI1 272 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 GTSCR1Q86UQ5 136 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 CYB561D1Q8N8Q1 229 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 TMEM191AQ9H0A3 160 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 NBEAP1P0C6P0 100 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 CKS2P33552 79 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 TMEM219Q86XT9 240 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 NEUROG1Q92886 237 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 TANC1Q9C0D5 1861 aa5.72□□□□□ -1.49
SRGAP1-206ENST00000543397 C7orf77A4D0Y5 90 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 C9JCJ5 164 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 E7EQL1 145 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 CRYBB3P26998 211 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 ELOBQ15370 118 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 ZNF343Q6P1L6 599 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 DUX3Q96PT4 197 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 RPRMQ9NS64 109 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 FBLN5Q9UBX5 448 aa5.71□□□□□ -1.49
SRGAP1-206ENST00000543397 SONP18583 2426 aaKnown RBP5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 TRAV41A0A0B4J266 112 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 RBFOX2O43251 390 aaKnown RBP eCLIP5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 IQCJQ1A5X6 159 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 CD300EQ496F6 205 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 C2orf83Q53S99 150 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 RPRMLQ8N4K4 120 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 DERL1Q9BUN8 251 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 MCRIP2Q9BUT9 160 aaKnown RBP5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 M0R1W7 72 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 IL6RP08887 468 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 AGAP20933 346 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 ZP1P60852 638 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 KLRD1Q13241 179 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 DHRS11Q6UWP2 260 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 GPR82Q96P67 336 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 MAP1LC3CQ9BXW4 147 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 PLXNA3P51805 1871 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 SIP14410 1827 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 NPFFO15130 113 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 HSPB1P04792 205 aaKnown RBP5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM200BQ69YZ2 307 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 KIAA2026Q5HYC2 2103 aa5.71□□□□□ -1.5
SRGAP1-206ENST00000543397 GTF3C1Q12789 2109 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 PRR32B1ATL7 298 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 GCGP01275 180 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 IGFBP2P18065 325 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 GATA3P23771 443 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 IFITM3Q01628 133 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 TMEM155Q4W5P6 130 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 DTX2Q86UW9 622 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 LINC01587Q99440 93 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 LOC389332A0A1B0GUA5 103 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 MSMBP08118 114 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 ZNF250P15622 560 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 COL8A2P25067 703 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 ANXA2RQ3ZCQ2 193 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 STPG2Q8N412 459 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 OR8A1Q8NGG7 326 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 FUT9Q9Y231 359 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 NOTCH4Q99466 2003 aa5.7□□□□□ -1.5
SRGAP1-206ENST00000543397 TRGV2A0A075B6R0 118 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms