RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 RBFOX2O43251 390 aaKnown RBP eCLIP7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 IGKV1D-12P01611 117 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 CD8AP01732 235 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 GP9P14770 177 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 TMEM252Q8N6L7 170 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 OR1P1Q8NH06 330 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 SMIM8Q96KF7 97 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 A0A087WX48 190 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 ZNF503-AS2A6NEH8 195 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 M0R2Z0 102 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 SEC11BP0C7V7 166 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 TMEM97Q5BJF2 176 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 TCTEX1D4Q5JR98 221 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 AKAP6Q13023 2319 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 EIF3GO75821 320 aaKnown RBP eCLIP7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 VAMP8Q9BV40 100 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 TMEM218A2RU14 115 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 PRSS1P07477 247 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 CGB3P0DN86 165 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 IGFBP2P18065 325 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 TOMM20LQ6UXN7 152 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 OR11H4Q8NGC9 324 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 NRN1Q9NPD7 142 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 SMAD5-AS1Q9Y6J3 95 aa7.02□□□□□ -1.29
FNDC3A-206ENST00000541916 HERVK_113P61574 105 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 SEC11CQ9BY50 192 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 SHISA3A0PJX4 238 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 PNRC1Q12796 327 aaPredicted RBP7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 OR10J3Q5JRS4 329 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 DUX4L9Q6RFH8 374 aaPredicted RBP7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 OR10W1Q8NGF6 305 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 COQ2Q96H96 371 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 SGK494Q96LW2 274 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 IGKV1-27A0A075B6S5 117 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 CENPVL3A0A0U1RRI6 287 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 C7orf66A4D0T2 115 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 FCN3O75636 299 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 SNRPEP62304 92 aaKnown RBP7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 TRAV9-2A0A087WT02 112 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 LOC389332A0A1B0GUA5 103 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 F8VVB4 439 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 F8VWA3 439 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 APCSP02743 223 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 ZNF562Q6V9R5 426 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 KIF26BQ2KJY2 2108 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 NOTCH2Q04721 2471 aa7.01□□□□□ -1.29
FNDC3A-206ENST00000541916 NBEAP1P0C6P0 100 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 IER3P46695 156 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 FAM74A3Q4VXF1 159 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 SGMS2Q8NHU3 365 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 TAF15Q92804 592 aaKnown RBP eCLIP7□□□□□ -1.29
FNDC3A-206ENST00000541916 RAMP3O60896 148 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 CD74P04233 296 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 C1QL4Q86Z23 238 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 TMEM86BQ8N661 226 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 OR52E5Q8NH55 327 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 MYOZ3Q8TDC0 251 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 C5orf63A6NC05 138 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 IGHV3-53P01767 116 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 IGFBP3P17936 291 aaPredicted RBP7□□□□□ -1.29
FNDC3A-206ENST00000541916 RPL15P61313 204 aaKnown RBP7□□□□□ -1.29
FNDC3A-206ENST00000541916 FBLN7Q53RD9 439 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 OR4C5Q8NGB2 326 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 RCHY1Q96PM5 261 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 MYLKQ15746 1914 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 CBLN2Q8IUK8 224 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 C12orf57Q99622 126 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 ASCL2Q99929 193 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
FNDC3A-206ENST00000541916 RND3P61587 244 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 SERF2P84101 59 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 TMEM95Q3KNT9 176 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 Q6P435 159 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 CHCHD5Q9BSY4 110 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 KAAG1Q9UBP8 84 aa7□□□□□ -1.29
FNDC3A-206ENST00000541916 PHOX2AO14813 284 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 WISP2O76076 250 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 ARL14EPLP0DKL9 152 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 DEFB136Q30KP8 78 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 XCL2Q9UBD3 114 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 CCKARP32238 428 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 FUT9Q9Y231 359 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 TRAV8-6A0A0B4J262 113 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 B4DEV8 164 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 RPLP1P05386 114 aaKnown RBP6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 RPS11P62280 158 aaKnown RBP eCLIP6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 NHLRC3Q5JS37 347 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 SIGIRRQ6IA17 410 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 ZGRF1Q86YA3 2104 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 NDUFB4O95168 129 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 BCL2P10415 239 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 MPZP25189 248 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 MYCNOSP40205 109 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 H2BFSP57053 126 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 KIR2DL4Q99706 377 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 RARRES2Q99969 163 aa6.99□□□□□ -1.29
FNDC3A-206ENST00000541916 AP5S1Q9NUS5 200 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms