RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
LMO3-220ENST00000539232 VDAC1P21796 283 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 FCGR2CP31995 323 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 MC5RP33032 325 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 RAB9AP51151 201 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 CRIP2P52943 208 aaPredicted RBP5.59□□□□□ -1.51
LMO3-220ENST00000539232 SLC35B1P78383 322 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 IL15RAQ13261 267 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 FXYD3Q14802 87 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 PLGLAQ15195 96 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 ELOBQ15370 118 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 PRSS8Q16651 343 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 LRRC37A5PQ49AS3 106 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 SCGB2B2Q4G0G5 96 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 ZNF562Q6V9R5 426 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 DPPA3Q6W0C5 159 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.59□□□□□ -1.51
LMO3-220ENST00000539232 OR5T1Q8NG75 326 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 ISOC2Q96AB3 205 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 FLYWCH2Q96CP2 140 aaKnown RBP5.59□□□□□ -1.51
LMO3-220ENST00000539232 SEC22AQ96IW7 307 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 HIST1H2BLQ99880 126 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 B9D2Q9BPU9 175 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 GINS3Q9BRX5 216 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 SLC25A31Q9H0C2 315 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 OR5AC2Q9NZP5 309 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 ANAPC10Q9UM13 185 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 VSIG4Q9Y279 399 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 OR2W1Q9Y3N9 320 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 U3KQK5 164 aa5.59□□□□□ -1.51
LMO3-220ENST00000539232 IGHV4OR15-8A0A075B7B6 117 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 A0A087WW49 117 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 TRAV3A0A0B4J244 114 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 KIR2DL5BA0A0G2JN68 375 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 KIR2DL5BA0A0G2JPC4 375 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 C9JQL5 133 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 K7EPK0 472 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 CIDEAO60543 219 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 FCGR3BO75015 233 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 DIRAS3O95661 229 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 TRBV12-3P01733 135 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 PRH1P02810 166 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 IFNA6P05013 189 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 GZMBP10144 247 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 FABP4P15090 132 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 MYCNOSP40205 109 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 CDKN1BP46527 198 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 SLURP1P55000 103 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 FXYD4P59646 89 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 FHL3Q13643 280 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 AKIRIN2Q53H80 203 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 DEFB121Q5J5C9 76 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 C1orf194Q5T5A4 169 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 UNQ5815/PRO19632Q6UWF5 114 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 HAPLN4Q86UW8 402 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 PDPNQ86YL7 162 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 KIR2DL5AQ8N109 375 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 ZNF664Q8N3J9 261 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 OR2D3Q8NGH3 330 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 MUC7Q8TAX7 377 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 ABHD5Q8WTS1 349 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 C4orf3Q8WVX3 66 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 ARPC1AQ92747 370 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 TVP23CQ96ET8 276 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 HARBI1Q96MB7 349 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 TMEM208Q9BTX3 173 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
LMO3-220ENST00000539232 ZNF430Q9H8G1 570 aaPredicted RBP5.58□□□□□ -1.52
LMO3-220ENST00000539232 KIAA1456Q9P272 454 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
LMO3-220ENST00000539232 FOXA2Q9Y261 457 aaPredicted RBP5.58□□□□□ -1.52
LMO3-220ENST00000539232 RBM7Q9Y580 266 aaKnown RBP5.58□□□□□ -1.52
LMO3-220ENST00000539232 MSGN1A6NI15 193 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 CGB1A6NKQ9 187 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 H0YIZ8 118 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 PHOX2AO14813 284 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 PPYP01298 95 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 HBE1P02100 147 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 APOA2P02652 100 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 SAA1P0DJI8 122 aaPredicted RBP5.57□□□□□ -1.52
LMO3-220ENST00000539232 RPL12P30050 165 aaKnown RBP5.57□□□□□ -1.52
LMO3-220ENST00000539232 TAGLN2P37802 199 aaKnown RBP5.57□□□□□ -1.52
LMO3-220ENST00000539232 P2RY1P47900 373 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 CAMLGP49069 296 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 RPS20P60866 119 aaKnown RBP5.57□□□□□ -1.52
LMO3-220ENST00000539232 UBE2KP61086 200 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 EGFEM1PQ0D2K5 195 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 RPL7L1Q6DKI1 246 aaKnown RBP5.57□□□□□ -1.52
LMO3-220ENST00000539232 ZNF818PQ6ZRF7 136 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 SMIM15Q7Z3B0 74 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 ZNF645Q8N7E2 425 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 OR11H1Q8NG94 326 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 OR1N2Q8NGR9 330 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 CD300LFQ8TDQ1 290 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 DLX4Q92988 240 aaPredicted RBP5.57□□□□□ -1.52
LMO3-220ENST00000539232 TMEM18Q96B42 140 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 FAM210BQ96KR6 192 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 IMMP2LQ96T52 175 aa5.57□□□□□ -1.52
LMO3-220ENST00000539232 RNF5Q99942 180 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms