RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NFE4Q86UQ8 179 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 TUSC5Q8IXB3 177 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 RPP21Q9H633 154 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 A0A1W2PNR3 127 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 A0A1W2PP55 124 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 SYNGR3O43761 229 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF688P0C7X2 276 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF137PP52743 207 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 DIAPH2-AS1Q14236 149 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 OR1C1Q15619 314 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 C17orf99Q6UX52 265 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 DLX4Q92988 240 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 TSACCQ96A04 125 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 SLC25A33Q9BSK2 321 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 RAB9BQ9NP90 201 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 CSDC2Q9Y534 153 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 NCKAP5O14513 1909 aa6.95□□□□□ -1.3
SRGAP1-202ENST00000537556 PRSS46E5RG02 174 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 EFNA2O43921 213 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 MEOX1P50221 254 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 SLC25A53Q5H9E4 307 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 PEAR1Q5VY43 1037 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 Q6P435 159 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 TEN1Q86WV5 123 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 PGLYRP4Q96LB8 373 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 HSD17B10Q99714 261 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 NABP2Q9BQ15 211 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 PDE4DIPQ5VU43 2346 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 TRBV20-1A0A075B6N2 111 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 CA6P23280 308 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 FKBP2P26885 142 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 RUNX3Q13761 415 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 MEIG1Q5JSS6 88 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 Q6Q795 121 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 PIP4P2Q8N4L2 257 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 OR5AN1Q8NGI8 311 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 CDX2Q99626 313 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 TCF19Q9Y242 345 aa6.94□□□□□ -1.3
SRGAP1-202ENST00000537556 SHISA9B4DS77 424 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 KLK10O43240 276 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 DSCR4P56555 118 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 PPP1CAP62136 330 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 RPEQ96AT9 228 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 LINC00479Q96M42 142 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 HS3ST6Q96QI5 342 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 DLL3Q9NYJ7 618 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 TRAV24A0A0B4J272 114 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 C17orf98A8MV24 154 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 PEX7O00628 323 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 P01737 135 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 C8orf88P0DMB2 117 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 ASIPP42127 132 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 ABHD12Q8N2K0 398 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF441Q8N8Z8 693 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 DAZAP1Q96EP5 407 aaKnown RBP6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 A4D1N5 150 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 HAX1O00165 279 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 LTAP01374 205 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 RBP4P02753 201 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 EVI2AP22794 236 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 PRR30Q53SZ7 412 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 ASPHD1Q5U4P2 390 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 PIP4P1Q86T03 277 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF503Q96F45 646 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 COQ2Q96H96 371 aa6.93□□□□□ -1.3
SRGAP1-202ENST00000537556 IGKV3D-11A0A0A0MRZ8 115 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 GFRA3O60609 400 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 POU2AF1Q16633 256 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 LYRM7Q5U5X0 104 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 MT-CO3P00414 261 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 CD27P26842 260 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 UBE2L3P68036 154 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 FAM159AQ6UWV7 190 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 FAM169BQ8N8A8 192 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 PRSS22Q9GZN4 317 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 FAM234AQ9H0X4 552 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 FBXL15Q9H469 300 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 C7orf69Q9H7B7 122 aa6.92□□□□□ -1.3
SRGAP1-202ENST00000537556 HBDP02042 147 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 HLA-DRB4P13762 266 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 COL9A1P20849 921 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 RND1Q92730 232 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 DNAJC30Q96LL9 226 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 MRPL32Q9BYC8 188 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 KLRF1Q9NZS2 232 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 HLA-DRB4X5D2U9 266 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 PRRG2O14669 202 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 IL4P05112 153 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 SMCPP49901 116 aaPredicted RBP6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 LILRA6Q6PI73 481 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 PPP1R27Q86WC6 154 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 PATE1Q8WXA2 126 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 ZNF492Q9P255 531 aa6.91□□□□□ -1.3
SRGAP1-202ENST00000537556 B9A039 149 aa6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 EIF4EBP1Q13541 118 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-202ENST00000537556 ALKBH6Q3KRA9 238 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms