RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 HHEXQ03014 270 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 CFHR1Q03591 330 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 ZNF146Q15072 292 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 SGCBQ16585 318 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 Q6ZQT7 251 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 H1FNTQ75WM6 255 aaPredicted RBP3.04□□□□□ -1.92
MCF2-210ENST00000536274 ZNF843Q8N446 348 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 RAB1BQ9H0U4 201 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 FSCN3Q9NQT6 498 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 CYSLTR1Q9Y271 337 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 KLF13Q9Y2Y9 288 aaPredicted RBP3.04□□□□□ -1.92
MCF2-210ENST00000536274 PRRC2CQ9Y520 2896 aaKnown RBP3.04□□□□□ -1.92
MCF2-210ENST00000536274 IGKV2D-26A0A0A0MRZ7 120 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 A0A0J9YW62 118 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 FABP5P3A8MUU1 101 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 H0Y980 276 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 SYNGR1O43759 233 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 KALRNO60229 2985 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 CEACAM4O75871 244 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 HLA-DQA1P01909 254 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 FCER1GP30273 86 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 FBXW4P57775 412 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 Q6AWC8 147 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 ZNF562Q6V9R5 426 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 ZNF808Q8N4W9 903 aaPredicted RBP3.04□□□□□ -1.92
MCF2-210ENST00000536274 OR1L8Q8NGR8 309 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 PP6455Q8WZ26 134 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 RAB1CQ92928 201 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 DOCK7Q96N67 2140 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 OXGR1Q96P68 337 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
MCF2-210ENST00000536274 GGTLC1Q9BX51 225 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 MAP1LC3CQ9BXW4 147 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 SPRY4Q9C004 299 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 ZMAT4Q9H898 229 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 PROK2Q9HC23 129 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 FGF21Q9NSA1 209 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 CSDC2Q9Y534 153 aaKnown RBP3.04□□□□□ -1.92
MCF2-210ENST00000536274 CACNA1BQ00975 2339 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 LRP4O75096 1905 aa3.04□□□□□ -1.92
MCF2-210ENST00000536274 DSPP15924 2871 aaKnown RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 TRAV4A0A0B4J268 109 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 A0A1W2PR77 199 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 IGLV2-8P01709 118 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 THBDP07204 575 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 DSCR4P56555 118 aaPredicted RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 SSBP2P81877 361 aaPredicted RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 FOXI1Q12951 378 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 ZNF718Q3SXZ3 478 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 GAGE13Q4V321 117 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 ZC2HC1BQ5TFG8 222 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 MIR17HGQ75NE6 70 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 GCSAMQ8N6F7 178 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 H1FXQ92522 213 aaKnown RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 DUSP23Q9BVJ7 150 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 KLK5Q9Y337 293 aaPredicted RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 PMS2P5A8MQ11 134 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 HIGD1CA8MV81 97 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 A8MWL6 223 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 J3QR89 54 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CXorf1O96002 111 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 OR5AL1P0C617 328 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 SMIM10L1P0DMW3 83 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 B4GALT1P15291 398 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 TAS2R45P59539 299 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CACNG7P62955 275 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 MALLQ13021 153 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 RSPO1Q2MKA7 263 aaPredicted RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 FNDC7Q5VTL7 733 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 PCSK4Q6UW60 755 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 FAM214BQ7L5A3 538 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 ANKRD37Q7Z713 158 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 OSR2Q8N2R0 312 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 FGFRL1Q8N441 504 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 GJC3Q8NFK1 279 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 GTSF1Q8WW33 167 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 PIGCQ92535 297 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 TMEM54Q969K7 222 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 SNRNP40Q96DI7 357 aaKnown RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 SMIM10Q96HG1 83 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 PGLYRP4Q96LB8 373 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 FAM173AQ9BQD7 235 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 SAP30LQ9HAJ7 183 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 SDK1Q7Z5N4 2213 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 ZFHX2Q9C0A1 2572 aaPredicted RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 TRBV9A0A0B4J1U6 114 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 IGHV3-15A0A0B4J1V0 119 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 A0A0J9YY10 115 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 A0A1B0GX78 115 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 OTOL1A6NHN0 477 aaPredicted RBP3.03□□□□□ -1.92
MCF2-210ENST00000536274 LIPT2A6NK58 231 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 C21orf140B9A014 251 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 K7ENP7 123 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 IGLV2-14P01704 120 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 MT-ND6P03923 174 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CT45A6P0DMU7 189 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CT45A5P0DMU8 189 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 CT45A7P0DMV0 189 aa3.03□□□□□ -1.92
MCF2-210ENST00000536274 GP1BBP13224 206 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms