RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 COTL1Q14019 142 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 DEFB123Q8N688 67 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 GSX1Q9H4S2 264 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-232ENST00000535094 ASCL3Q9NQ33 180 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 DMDP11532 3685 aa12.99□□□□□ -0.33
MCF2L-232ENST00000535094 TRAV8-1A0A0A6YYK1 113 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 UPK2O00526 184 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 SPACA3Q8IXA5 215 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 OR8A1Q8NGG7 326 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 OR1L4Q8NGR5 311 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 PRSS3P2Q8NHM4 247 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 LOC400499M0QZD8 3231 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 TECTAO75443 2155 aa12.98□□□□□ -0.33
MCF2L-232ENST00000535094 NAA38Q9BRA0 125 aaKnown RBP12.98□□□□□ -0.33
MCF2L-232ENST00000535094 FBLN7Q53RD9 439 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 FAM90A1Q86YD7 464 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 TMEM191AQ9H0A3 160 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 TNFRSF19Q9NS68 423 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 CREBBPQ92793 2442 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 NKX6-3A6NJ46 265 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 CD69Q07108 199 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 MDS2Q8NDY4 140 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 TET2Q6N021 2002 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-232ENST00000535094 A0A1W2PRE2 83 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 LOXL3P58215 753 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 PRCDQ00LT1 54 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 LDLRAD2Q5SZI1 272 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 LOXL4Q96JB6 756 aa12.97□□□□□ -0.33
MCF2L-232ENST00000535094 ZNF430Q9H8G1 570 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-232ENST00000535094 DLL1O00548 723 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 TDGF1P13385 188 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 PRR20EP86478 221 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 PRR20CP86479 221 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 PRR20DP86480 221 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 PRR20BP86481 221 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 PRR20AP86496 221 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 FOXA2Q9Y261 457 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-232ENST00000535094 ASPMQ8IZT6 3477 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 SPAARA0A1B0GVQ0 90 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 EBLN2Q6P2I7 272 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 CHRDL1Q9BU40 450 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 TMEM14BQ9NUH8 114 aa12.96□□□□□ -0.33
MCF2L-232ENST00000535094 SLC25A10Q9UBX3 287 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-232ENST00000535094 TRAV17A0A0B4J275 112 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 A8MWL6 223 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 CNIH1O95406 144 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 DLX1P56177 255 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 EIF4EBP1Q13541 118 aaPredicted RBP12.96□□□□□ -0.34
MCF2L-232ENST00000535094 SLC25A34Q6PIV7 304 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 FA2HQ7L5A8 372 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 C11orf52Q96A22 123 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 DYNLRB1Q9NP97 96 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 S4R3C0 116 aa12.96□□□□□ -0.34
MCF2L-232ENST00000535094 TNRC6AQ8NDV7 1962 aaKnown RBP12.96□□□□□ -0.34
MCF2L-232ENST00000535094 A0A1W2PNU3 283 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-232ENST00000535094 GAGE1Q13065 139 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 LINC00173Q6ZV60 143 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 MUC15Q8N387 334 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 NBEAP1P0C6P0 100 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 CT45A6P0DMU7 189 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 CT45A5P0DMU8 189 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 CT45A7P0DMV0 189 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 NHLH1Q02575 133 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 TRGV8A0A0C4DH27 118 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 OR5AL1P0C617 328 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 CEACAM8P31997 349 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-232ENST00000535094 HBBP68871 147 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 RELQ04864 619 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-232ENST00000535094 GOLT1AQ6ZVE7 132 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 DEFB124Q8NES8 71 aa12.95□□□□□ -0.34
MCF2L-232ENST00000535094 IGKV3-15P01624 115 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 TMEM11P17152 192 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 COMPP49747 757 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-232ENST00000535094 FXYD7P58549 80 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 TMEM116Q8NCL8 245 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 NEUROG1Q92886 237 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 A0A087X0K7 114 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 RAB37Q96AX2 223 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 ZNF503Q96F45 646 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 C1orf159Q96HA4 380 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 COLQQ9Y215 455 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-232ENST00000535094 FAM87AP0C7U9 286 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 FAM27E3Q08E93 113 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 UBE2V1Q13404 147 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
MCF2L-232ENST00000535094 PRR33A8MZF0 331 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 RNASE2P10153 161 aaKnown RBP12.93□□□□□ -0.34
MCF2L-232ENST00000535094 COX7A1P24310 79 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 ZNF891A8MT65 544 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-232ENST00000535094 C17orf58Q2M2W7 97 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 FAM222BQ8WU58 562 aa12.93□□□□□ -0.34
MCF2L-232ENST00000535094 SRSF12Q8WXF0 261 aaKnown RBP12.93□□□□□ -0.34
MCF2L-232ENST00000535094 PERPQ96FX8 193 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms