RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 TSPAN4O14817 238 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 MED6O75586 246 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 IFNA21P01568 189 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 OR1S2Q8NGQ3 325 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 ST8SIA2Q92186 375 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 NPIPB3Q92617 1050 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 METTL26Q96S19 204 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 SPATA25Q9BR10 227 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 CCDC32Q9BV29 185 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 ZFAND3Q9H8U3 227 aa11.9□□□□□ -0.5
PAX6-230ENST00000534390 TRAV6A0A075B6T7 132 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 WRBO00258 174 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 PLA2G10O15496 165 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 PITX3O75364 302 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 APOHP02749 345 aaPredicted RBP11.89□□□□□ -0.51
PAX6-230ENST00000534390 SLC25A6P12236 298 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 NPPCP23582 126 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 RAB11AP62491 216 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 TCF24Q7RTU0 167 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 GBGT1Q8N5D6 347 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 S100ZQ8WXG8 99 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
PAX6-230ENST00000534390 SLC35E1Q96K37 410 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 RETNQ9HD89 108 aa11.89□□□□□ -0.51
PAX6-230ENST00000534390 RBMY1BA6NDE4 496 aaKnown RBP11.88□□□□□ -0.51
PAX6-230ENST00000534390 RBMY1EA6NEQ0 496 aaKnown RBP11.88□□□□□ -0.51
PAX6-230ENST00000534390 A6NHS1 94 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 FAM90A26D6RGX4 464 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 SYNGR2O43760 224 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 IGKV1-17P01599 117 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 RBMY1DP0C7P1 496 aaKnown RBP11.88□□□□□ -0.51
PAX6-230ENST00000534390 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 WFDC3Q8IUB2 231 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 Q8WTZ3 238 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 TMEM231Q9H6L2 316 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 NUDT15Q9NV35 164 aa11.88□□□□□ -0.51
PAX6-230ENST00000534390 MPTX1A8MV57 137 aa11.87□□□□□ -0.51
PAX6-230ENST00000534390 H3BP45 60 aa11.87□□□□□ -0.51
PAX6-230ENST00000534390 SCGB1D2O95969 90 aa11.87□□□□□ -0.51
PAX6-230ENST00000534390 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
PAX6-230ENST00000534390 CIB3Q96Q77 187 aaPredicted RBP11.87□□□□□ -0.51
PAX6-230ENST00000534390 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 DNASE2O00115 360 aaPredicted RBP11.86□□□□□ -0.51
PAX6-230ENST00000534390 SSSCA1O60232 199 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 DFFBO76075 338 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 TCRBP04435 133 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 IL4P05112 153 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 PAFAH1B2P68402 229 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 SPANXN5Q5MJ07 72 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 GGTLC1Q9BX51 225 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
PAX6-230ENST00000534390 LOC102724200A0A096LPH7 203 aaPredicted RBP11.85□□□□□ -0.51
PAX6-230ENST00000534390 FAM240BA0A1B0GVZ2 78 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 A0A1W2PS18 150 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 RD3LP0DJH9 198 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 NKX2-1P43699 371 aaPredicted RBP11.85□□□□□ -0.51
PAX6-230ENST00000534390 ATP5IP56385 69 aaPredicted RBP11.85□□□□□ -0.51
PAX6-230ENST00000534390 ZNF846Q147U1 533 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 ODF3L2Q3SX64 289 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 MZT2BQ6NZ67 158 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 LINC00299Q6ZSB3 139 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 LILRB2Q8N423 598 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 PBDC1Q9BVG4 233 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 WDR12Q9GZL7 423 aaKnown RBP11.85□□□□□ -0.51
PAX6-230ENST00000534390 VSIRQ9H7M9 311 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 GSKIPQ9P0R6 139 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 RABAC1Q9UI14 185 aa11.85□□□□□ -0.51
PAX6-230ENST00000534390 FAM25EA8MYX2 175 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 CD5P06127 495 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
PAX6-230ENST00000534390 P2RY1P47900 373 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 YPEL3P61236 119 aaPredicted RBP11.84□□□□□ -0.51
PAX6-230ENST00000534390 POLR2GP62487 172 aaKnown RBP eCLIP11.84□□□□□ -0.51
PAX6-230ENST00000534390 GAMTQ14353 236 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
PAX6-230ENST00000534390 APRG1Q8IVJ8 170 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 STXBP6Q8NFX7 210 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 CITED4Q96RK1 184 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 MS4A6AQ9H2W1 248 aa11.84□□□□□ -0.51
PAX6-230ENST00000534390 STRAPQ9Y3F4 350 aaKnown RBP11.84□□□□□ -0.51
PAX6-230ENST00000534390 CCSO14618 274 aa11.83□□□□□ -0.52
PAX6-230ENST00000534390 TOMM40O96008 361 aa11.83□□□□□ -0.52
PAX6-230ENST00000534390 HNRNPCP07910 306 aaKnown RBP eCLIP11.83□□□□□ -0.52
PAX6-230ENST00000534390 H2AFB2P0C5Z0 115 aa11.83□□□□□ -0.52
PAX6-230ENST00000534390 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
PAX6-230ENST00000534390 CRYBB3P26998 211 aa11.83□□□□□ -0.52
PAX6-230ENST00000534390 LINC00322Q6ZN03 302 aaPredicted RBP11.83□□□□□ -0.52
PAX6-230ENST00000534390 MITD1Q8WV92 249 aa11.83□□□□□ -0.52
PAX6-230ENST00000534390 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
PAX6-230ENST00000534390 TBC1D24Q9ULP9 559 aa11.83□□□□□ -0.52
PAX6-230ENST00000534390 SMCO3A2RU48 225 aa11.82□□□□□ -0.52
PAX6-230ENST00000534390 FABP1P07148 127 aa11.82□□□□□ -0.52
PAX6-230ENST00000534390 PSG1P11464 419 aa11.82□□□□□ -0.52
PAX6-230ENST00000534390 AKR1C1Q04828 323 aa11.82□□□□□ -0.52
PAX6-230ENST00000534390 OR2F1Q13607 317 aa11.82□□□□□ -0.52
PAX6-230ENST00000534390 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms