RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 RAB31Q13636 194 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 FAM223AQ8IWN6 122 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 STPG3Q8N7X2 389 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 ZNF502Q8TBZ5 544 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 RNF141Q8WVD5 230 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 TRGV9Q99603 122 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 JMJD1CQ15652 2540 aa12.41□□□□□ -0.42
TRIM3-213ENST00000533309 TCRBV4S1A1TA0A5B7 111 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 ZFP92A6NM28 416 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 IGKV1-17P01599 117 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 PF4V1P10720 104 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 GATA2P23769 480 aaPredicted RBP12.4□□□□□ -0.42
TRIM3-213ENST00000533309 PSMB8P28062 276 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 FCGR2BP31994 310 aaPredicted RBP12.4□□□□□ -0.42
TRIM3-213ENST00000533309 MFAP4P55083 255 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 CLLU1Q5K131 121 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 FFAR4Q5NUL3 377 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 LCNL1Q6ZST4 164 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 CYP2G1PQ6ZSU1 146 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 CCDC140Q96MF4 163 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 JMJD8Q96S16 334 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 RPRMQ9NS64 109 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 NPBWR1P48145 328 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 RAB5CP51148 216 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 TPPP2P59282 170 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 RAB2AP61019 212 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 B2MP61769 119 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 GCSAMLQ5JQS6 135 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 AKR1C8PQ5T2L2 129 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 BPIFCQ8NFQ6 507 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 CXorf58Q96LI9 332 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 KCNIP2Q9NS61 270 aa12.4□□□□□ -0.42
TRIM3-213ENST00000533309 PSMB11A5LHX3 300 aa12.39□□□□□ -0.43
TRIM3-213ENST00000533309 TSPAN15O95858 294 aa12.39□□□□□ -0.43
TRIM3-213ENST00000533309 RAB9AP51151 201 aa12.39□□□□□ -0.43
TRIM3-213ENST00000533309 TIGITQ495A1 244 aa12.39□□□□□ -0.43
TRIM3-213ENST00000533309 TMEM41BQ5BJD5 291 aa12.39□□□□□ -0.43
TRIM3-213ENST00000533309 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
TRIM3-213ENST00000533309 TMEM89A2RUT3 159 aa12.38□□□□□ -0.43
TRIM3-213ENST00000533309 ZNF705EA8MWA4 302 aaPredicted RBP12.38□□□□□ -0.43
TRIM3-213ENST00000533309 GNG7O60262 68 aa12.38□□□□□ -0.43
TRIM3-213ENST00000533309 ATP5G2Q06055 141 aa12.38□□□□□ -0.43
TRIM3-213ENST00000533309 Q56UQ5 140 aa12.38□□□□□ -0.43
TRIM3-213ENST00000533309 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
TRIM3-213ENST00000533309 FAM213BQ8TBF2 198 aa12.38□□□□□ -0.43
TRIM3-213ENST00000533309 LRRC20Q8TCA0 184 aa12.38□□□□□ -0.43
TRIM3-213ENST00000533309 TXN2Q99757 166 aa12.38□□□□□ -0.43
TRIM3-213ENST00000533309 OR2T8A6NH00 312 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 TCF21O43680 179 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 CTSGP08311 255 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 M6PRP20645 277 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 ADMP35318 185 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 SELENOTP62341 195 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 SLC35B1P78383 322 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-213ENST00000533309 ZNF726P1Q15940 193 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 Q6ZRG5 221 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 SSX7Q7RTT5 188 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 EEF1AKMT3Q96AZ1 226 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 SAT2Q96F10 170 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-213ENST00000533309 ZNF414Q96IQ9 312 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 USMG5Q96IX5 58 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 TRBV7-1A0A0A6YYK4 115 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 CRYBA1P05813 215 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 GPR183P32249 361 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 RAB14P61106 215 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 FOXE3Q13461 319 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 PXDC1Q5TGL8 231 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 TEX38Q6PEX7 206 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 DPPA3Q6W0C5 159 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 RNF152Q8N8N0 203 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 MYOZ3Q8TDC0 251 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 RCC1LQ96I51 464 aaKnown RBP12.37□□□□□ -0.43
TRIM3-213ENST00000533309 CHRDL1Q9BU40 450 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 C16orf95Q9H693 158 aa12.37□□□□□ -0.43
TRIM3-213ENST00000533309 TRAV30A0A087WSZ9 112 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 MBP02144 154 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 ELANEP08246 267 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 PSG1P11464 419 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 ACOT6Q3I5F7 207 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-213ENST00000533309 CLEC19AQ6UXS0 136 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 OR10G4Q8NGN3 311 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 OR10G9Q8NGN4 311 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 OR10G7Q8NGN6 311 aa12.36□□□□□ -0.43
TRIM3-213ENST00000533309 WIPF2Q8TF74 440 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-213ENST00000533309 RPLP1P05386 114 aaKnown RBP12.35□□□□□ -0.43
TRIM3-213ENST00000533309 CLEC3BP05452 202 aa12.35□□□□□ -0.43
TRIM3-213ENST00000533309 YPEL3P61236 119 aaPredicted RBP12.35□□□□□ -0.43
TRIM3-213ENST00000533309 SRSF2Q01130 221 aaKnown RBP12.35□□□□□ -0.43
TRIM3-213ENST00000533309 ZNF616Q08AN1 781 aa12.35□□□□□ -0.43
TRIM3-213ENST00000533309 KLHDC1Q8N7A1 406 aa12.35□□□□□ -0.43
TRIM3-213ENST00000533309 LINC01006Q8NI28 216 aa12.35□□□□□ -0.43
TRIM3-213ENST00000533309 ATP6V0BQ99437 205 aa12.35□□□□□ -0.43
TRIM3-213ENST00000533309 A0A0G2JLM5 398 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 SEC14L6B5MCN3 397 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 EIF3GO75821 320 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRIM3-213ENST00000533309 NDUFA7O95182 113 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 TOMM40O96008 361 aa12.34□□□□□ -0.43
TRIM3-213ENST00000533309 IGHV3-11P01762 117 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms