RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MIR17HGQ75NE6 70 aa10.17□□□□□ -0.78
BDNF-218ENST00000533246 KIR2DL5AQ8N109 375 aa10.17□□□□□ -0.78
BDNF-218ENST00000533246 SPSB4Q96A44 273 aa10.17□□□□□ -0.78
BDNF-218ENST00000533246 RANBP2P49792 3224 aaKnown RBP10.17□□□□□ -0.78
BDNF-218ENST00000533246 SAA2-SAA4A0A096LPE2 208 aa10.17□□□□□ -0.78
BDNF-218ENST00000533246 SAA2P0DJI9 122 aaPredicted RBP10.17□□□□□ -0.78
BDNF-218ENST00000533246 TMEM249Q2WGJ8 235 aa10.17□□□□□ -0.78
BDNF-218ENST00000533246 OR4A5Q8NH83 315 aa10.17□□□□□ -0.78
BDNF-218ENST00000533246 TMEM250H0YL14 139 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 IGKV1-5P01602 117 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 OR9G9P0C7N8 305 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 C1QTNF9P0C862 333 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 SMIM17P0DL12 118 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 MYOD1P15172 320 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 GOLT1AQ6ZVE7 132 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 FAM169BQ8N8A8 192 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 OR52E5Q8NH55 327 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 WIPF3A6NGB9 483 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 C17orf100A8MU93 164 aa10.16□□□□□ -0.78
BDNF-218ENST00000533246 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 A8MWL6 223 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 CDKN1AP38936 164 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 SSX8Q7RTT4 187 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 TCF23Q7RTU1 214 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 WDR31Q8NA23 367 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 MBD3L1Q8WWY6 194 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 SS18L1O75177 396 aaPredicted RBP10.15□□□□□ -0.78
BDNF-218ENST00000533246 SPINK8P0C7L1 97 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 LY6EQ16553 131 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 ANXA2RQ3ZCQ2 193 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 TMEM42Q69YG0 159 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 LINC00305Q7Z4B0 112 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 TEX29Q8N6K0 151 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 CRIM1Q9NZV1 1036 aa10.15□□□□□ -0.78
BDNF-218ENST00000533246 ANOS1P23352 680 aa10.15□□□□□ -0.79
BDNF-218ENST00000533246 CYP2G1PQ6ZSU1 146 aa10.15□□□□□ -0.79
BDNF-218ENST00000533246 RPP25LQ8N5L8 163 aaKnown RBP10.15□□□□□ -0.79
BDNF-218ENST00000533246 SNRNP40Q96DI7 357 aaKnown RBP10.15□□□□□ -0.79
BDNF-218ENST00000533246 SDF2L1Q9HCN8 221 aa10.15□□□□□ -0.79
BDNF-218ENST00000533246 MBNL3Q9NUK0 354 aaKnown RBP10.15□□□□□ -0.79
BDNF-218ENST00000533246 BRCA2P51587 3418 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 TRAV3A0A0B4J244 114 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 IGHV3-66A0A0C4DH42 116 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 IL4P05112 153 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 DUTP33316 252 aaKnown RBP10.14□□□□□ -0.79
BDNF-218ENST00000533246 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 SRSF12Q8WXF0 261 aaKnown RBP10.14□□□□□ -0.79
BDNF-218ENST00000533246 CLEC7AQ9BXN2 247 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 MKI67P46013 3256 aaKnown RBP10.14□□□□□ -0.79
BDNF-218ENST00000533246 ZNF503-AS2A6NEH8 195 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 SAA1P0DJI8 122 aaPredicted RBP10.14□□□□□ -0.79
BDNF-218ENST00000533246 LCN12Q6JVE5 192 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 FAM90A1Q86YD7 464 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 RPRMLQ8N4K4 120 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 ARHGAP21Q5T5U3 1957 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 IGKV1-6A0A0C4DH72 117 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.14□□□□□ -0.79
BDNF-218ENST00000533246 IGLC2P0DOY2 106 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 IGLC3P0DOY3 106 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 RPL23P62829 140 aaKnown RBP10.14□□□□□ -0.79
BDNF-218ENST00000533246 ODF1Q14990 250 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 ZNF146Q15072 292 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 NMSQ5H8A3 153 aa10.14□□□□□ -0.79
BDNF-218ENST00000533246 GAGE12HA6NDE8 117 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 LY6HO94772 140 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 C1orf162Q8NEQ5 155 aaPredicted RBP10.13□□□□□ -0.79
BDNF-218ENST00000533246 FAM57AQ8TBR7 257 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 IFI27L2Q9H2X8 130 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 A0A0C4DFX4 3053 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 HIVEP3Q5T1R4 2406 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 CCDC144NLQ6NUI1 221 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 LRTM2Q8N967 370 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 ZNRD1Q9P1U0 126 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 PLXNB1O43157 2135 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 CHD8Q9HCK8 2581 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 GCSHP23434 173 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 LCN2P80188 198 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 RIGQ13278 110 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 C5orf30Q96GV9 206 aa10.13□□□□□ -0.79
BDNF-218ENST00000533246 RNASE7Q9H1E1 156 aaKnown RBP10.13□□□□□ -0.79
BDNF-218ENST00000533246 USP9YO00507 2555 aaPredicted RBP10.13□□□□□ -0.79
BDNF-218ENST00000533246 MLNRO43193 412 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 APOBEC3AP31941 199 aaPredicted RBP10.12□□□□□ -0.79
BDNF-218ENST00000533246 FAM71F2Q6NXP2 309 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 LINC00473A8K010 186 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 TMEM50AO95807 157 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 IGHV1-46P01743 117 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 MAS1LP35410 378 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 TM4SF20Q53R12 229 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 CYSLTR1Q9Y271 337 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 AMY1AP04745 511 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 PYYP10082 97 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 SRSF7Q16629 238 aaKnown RBP eCLIP10.12□□□□□ -0.79
BDNF-218ENST00000533246 MLANAQ16655 118 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 MDS2Q8NDY4 140 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 SPTBN4Q9H254 2564 aa10.12□□□□□ -0.79
BDNF-218ENST00000533246 COX19Q49B96 90 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms