RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 HIGD1AQ9Y241 93 aa2.57□□□□□ -2
AC055878.1-201ENST00000531858 TIMM9Q9Y5J7 89 aa2.57□□□□□ -2
AC055878.1-201ENST00000531858 CHD5Q8TDI0 1954 aa2.57□□□□□ -2
AC055878.1-201ENST00000531858 A2MP01023 1474 aa2.57□□□□□ -2
AC055878.1-201ENST00000531858 ADGBQ8N7X0 1667 aa2.57□□□□□ -2
AC055878.1-201ENST00000531858 LOXHD1Q8IVV2 1947 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 TRAV7A0A075B6U4 112 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 IGHV1-58A0A0C4DH39 117 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 MIF4GDA9UHW6 222 aaKnown RBP2.56□□□□□ -2
AC055878.1-201ENST00000531858 GNRH2O43555 120 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 OR2T1O43869 369 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 GAS8-AS1O95177 125 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 CPSF4O95639 269 aaKnown RBP2.56□□□□□ -2
AC055878.1-201ENST00000531858 APOC1P02654 83 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 SDC2P34741 201 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 EIF4EBP1Q13541 118 aaPredicted RBP2.56□□□□□ -2
AC055878.1-201ENST00000531858 TMEM136Q6ZRR5 245 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 DEFB128Q7Z7B8 93 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 BPIFA4PQ86YQ2 179 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 OR2T10Q8NGZ9 312 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 STAG3L4Q8TBR4 150 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 WFDC5Q8TCV5 224 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 TMEM106AQ96A25 262 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 GINS4Q9BRT9 223 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 ADAT1Q9BUB4 502 aaKnown RBP2.56□□□□□ -2
AC055878.1-201ENST00000531858 RIC1Q4ADV7 1423 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 MED1Q15648 1581 aaPredicted RBP2.56□□□□□ -2
AC055878.1-201ENST00000531858 BRWD3Q6RI45 1802 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 DSCAML1Q8TD84 2053 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 ZNF318Q5VUA4 2279 aa2.56□□□□□ -2
AC055878.1-201ENST00000531858 J3QQQ9 107 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 LYZL6O75951 148 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 IFNA4P05014 189 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 HLA-EP13747 358 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 ZNF22P17026 224 aaPredicted RBP2.55□□□□□ -2
AC055878.1-201ENST00000531858 RPL35P42766 123 aaKnown RBP2.55□□□□□ -2
AC055878.1-201ENST00000531858 RPL28P46779 137 aaKnown RBP2.55□□□□□ -2
AC055878.1-201ENST00000531858 WHAMMP3Q1A5X7 153 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 RFX7Q2KHR2 1363 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 KRTAP25-1Q3LHN0 102 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 VMA21Q3ZAQ7 101 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 Q6ZS52 159 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 C1orf64Q8NEQ6 169 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 MCEEQ96PE7 176 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 VPS25Q9BRG1 176 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 LINC00467Q9BRT7 94 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 CALML5Q9NZT1 146 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 NAT8Q9UHE5 227 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 YEATS2Q9ULM3 1422 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 HS3ST2Q9Y278 367 aa2.55□□□□□ -2
AC055878.1-201ENST00000531858 ADGRL1O94910 1474 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 OVOS2A0A0J9YW53 1432 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 OVOS2Q6IE36 1432 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 TRBV10-2A0A0K0K1G8 114 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 COLCA2A8K830 154 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 H3BT86 120 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 HIST1H2BKO60814 126 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 SMIM24O75264 130 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 HIST1H2BJP06899 126 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 TMBIM6P55061 237 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 HBBP68871 147 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 SLC38A11Q08AI6 406 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 KISS1Q15726 138 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 DNLZQ5SXM8 178 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 DPPA3Q6W0C5 159 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 OR4S1Q8NGB4 309 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 C2orf88Q9BSF0 95 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 PSORS1C2Q9UIG4 136 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 U3KQ87 197 aa2.54□□□□□ -2
AC055878.1-201ENST00000531858 SLIT3O75094 1523 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 SVILO95425 2214 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 IGKV2-28A0A075B6P5 120 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 IGHV3-64A0A075B6Q5 118 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 LOC107984640A0A0U1RRK4 108 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 MDFIC2A0A1B0GVS7 189 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 H7C2G1 150 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 NDUFB3O43676 98 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 IGKV2D-28P01615 120 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 HTR1AP08908 422 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 TSPAN19P0C672 248 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 METTL15P1P0C7V9 234 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 DNAJB13P59910 316 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 SELENOWP63302 87 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 KHDC3LQ587J8 217 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 Q5XG85 94 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 EIF5AL1Q6IS14 154 aaKnown RBP2.53□□□□□ -2
AC055878.1-201ENST00000531858 LINC00305Q7Z4B0 112 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 HMGN2P46Q86SG4 172 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 OR51A4Q8NGJ6 313 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 OR5D16Q8NGK9 328 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 OR4K15Q8NH41 348 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 FGF13Q92913 245 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 NPCDR1Q9BY65 106 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 CACYBPQ9HB71 228 aaKnown RBP2.53□□□□□ -2
AC055878.1-201ENST00000531858 HHLA3Q9XRX5 114 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 RNF11Q9Y3C5 154 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 R4GN34 69 aa2.53□□□□□ -2
AC055878.1-201ENST00000531858 ARHGAP21Q5T5U3 1957 aa2.52□□□□□ -2.01
AC055878.1-201ENST00000531858 CCDC171Q6TFL3 1326 aa2.52□□□□□ -2.01
AC055878.1-201ENST00000531858 IGLV2-18A0A075B6J9 118 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms