RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 TEX50A0A1B0GTY4 177 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 MDFIC2A0A1B0GVS7 189 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 C1orf226A1L170 272 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 USP17L23D6RBM5 183 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 LMO7DNF2Z398 122 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 J3QQQ9 107 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 NKX2-2O95096 273 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 TRACP01848 142 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 IGFBP3P17936 291 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 CRYGSP22914 178 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 CBLN1P23435 193 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 HLA-DMBP28068 263 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 HILS1P60008 231 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 RPS11P62280 158 aaKnown RBP eCLIP3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 LOXL1Q08397 574 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 EIF3IQ13347 325 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 FHL3Q13643 280 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 PHLDA2Q53GA4 152 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 DMRTC1Q5HYR2 192 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 MS4A13Q5J8X5 152 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 FAM27D1Q5T7N8 215 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 CFAP126Q5VTH2 177 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 NOXRED1Q6NXP6 359 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 Q6P435 159 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 RPS27LQ71UM5 84 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 RNF144BQ7Z419 303 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 HSD11B1LQ7Z5J1 315 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 TDHQ8IZJ6 230 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 SLC25A45Q8N413 288 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 ANKRD29Q8N6D5 301 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 C15orf53Q8NAA6 179 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 OR10AC1Q8NH08 325 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 TMEM255BQ8WV15 326 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 BADQ92934 168 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 CLDN23Q96B33 292 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 CHCHD1Q96BP2 118 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 ZNF501Q96CX3 271 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 SAP30LQ9HAJ7 183 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 RETNQ9HD89 108 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 FSCN3Q9NQT6 498 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 GNG13Q9P2W3 67 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 PEMTQ9UBM1 199 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 TMED7Q9Y3B3 224 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 KCNE3Q9Y6H6 103 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 ARL2-SNX15V9GYD0 113 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 KIAA1549Q9HCM3 1950 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 SCN10AQ9Y5Y9 1956 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 KIAA2026Q5HYC2 2103 aa3.88□□□□□ -1.79
ECHDC1-221ENST00000531582 PTPRDP23468 1912 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 SCN3AQ9NY46 2000 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 TRAV18A0A075B6X5 111 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 FAM240AA0A1B0GVK7 77 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 LY6LH3BQJ8 138 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 TMEM178BH3BS89 294 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 H3BTX0 84 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 SDCBPO00560 298 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 SSSCA1O60232 199 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 ZFAND5O76080 213 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 CPSF4O95639 269 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 IGHG2P01859 326 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 HLA-DRB4P13762 266 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 COX7CP15954 63 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 CDAP32320 146 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 PFN2P35080 140 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 PPP1CAP62136 330 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 HES3Q5TGS1 186 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 PQLC2Q6ZP29 291 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 Q71RC1 249 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 PRSS41Q7RTY9 318 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 RPS19BP1Q86WX3 136 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 C11orf53Q8IXP5 236 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 SSC4DQ8WTU2 575 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 FGF13Q92913 245 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 DLX4Q92988 240 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 GFI1Q99684 422 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 TMEM147Q9BVK8 224 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 TMEM59Q9BXS4 323 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 ANAPC10Q9UM13 185 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 PKIGQ9Y2B9 76 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 PYGO1Q9Y3Y4 419 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 HLA-DRB4X5D2U9 266 aa3.87□□□□□ -1.79
ECHDC1-221ENST00000531582 TRBV5-5A0A0J9YX44 114 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 A0A0U1RQV1 116 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 FAM236DA0A1B0GTK5 79 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 LINC01548A6NM66 108 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 CEBPZOSA8MTT3 80 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 SNURFLB1AK76 121 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 IGLL5B9A064 214 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 LINC01619G3V211 115 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 FFAR1O14842 300 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 LMX1BO60663 402 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 NDUFB4O95168 129 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 RBP4P02753 201 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 FGF1P05230 155 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 FAM236CP0DP71 79 aa3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 PEBP1P30086 187 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-221ENST00000531582 FOXA3P55318 350 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms