RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CACNA1DQ01668 2161 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 INTS1Q8N201 2190 aaKnown RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 ANKRD11Q6UB99 2663 aaPredicted RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 PTPRBP23467 1997 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 HEATR1Q9H583 2144 aaKnown RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 ICE1Q9Y2F5 2266 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 TRGV5A0A0B4J1U4 118 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 IGHV3-21A0A0B4J1V1 117 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 A0A0J9YW62 118 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 ARGFXA6NJG6 315 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 F5H5P2 479 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 MKRN2OSH3BPM6 223 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 MRPL33O75394 65 aaKnown RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 ISG15P05161 165 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 CECR9P0C854 216 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 P0C880 135 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 SLC2A1P11166 492 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 GTF2F2P13984 249 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 HRES1P13985 223 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 CTLA4P16410 223 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 ZNF708P17019 499 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 CD40LGP29965 261 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 SDC2P34741 201 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 ETV6P41212 452 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 DEFA1P59665 94 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 DEFA3P59666 94 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 UBE2KP61086 200 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 LSM3P62310 102 aaKnown RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 PPP3R1P63098 170 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 FABP5Q01469 135 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 ZNF846Q147U1 533 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 SPCS2Q15005 226 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 CDK5R1Q15078 307 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 TNXAQ16473 311 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 HIST3H3Q16695 136 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 ACSM3Q53FZ2 586 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 C10orf128Q5T292 105 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 FAM27BQ5VT28 67 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 TMEM244Q5VVB8 128 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 LRRN1Q6UXK5 716 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 AAED1Q7RTV5 226 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 C20orf196Q8IYI0 205 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 TMEM251Q8N6I4 163 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 YIPF7Q8N8F6 280 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 FDCSPQ8NFU4 85 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 OR10D3Q8NH80 312 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 OR5AK2Q8NH90 309 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 RNF133Q8WVZ7 376 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 FXYD5Q96DB9 178 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 TBX5Q99593 518 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 TTTY12Q9BZ98 90 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 LINC00470Q9BZP3 86 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 C6orf62Q9GZU0 229 aaPredicted RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 OR51E2Q9H255 320 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 RERGLQ9H628 205 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 RNF122Q9H9V4 155 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 PLEKHA1Q9HB21 404 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 TXNL4BQ9NX01 149 aaKnown RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 MED29Q9NX70 200 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 GLTPQ9NZD2 209 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 CYB5R1Q9UHQ9 305 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 HHLA2Q9UM44 414 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 CADP27708 2225 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 ROS1P08922 2347 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 SPTAN1Q13813 2472 aaKnown RBP1.96□□□□□ -2.1
SKP1-212ENST00000523966 CEP295Q9C0D2 2601 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 MED12LQ86YW9 2145 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 ABCA4P78363 2273 aa1.96□□□□□ -2.1
SKP1-212ENST00000523966 NCOR2Q9Y618 2525 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 PLCE1Q9P212 2302 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 COL6A6A6NMZ7 2263 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 A0A0G2JMM0 328 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 TMEM269A0A1B0GVZ9 245 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 A0A1W2PPB8 328 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 A0A1W2PRS3 328 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 OR6C6A6NF89 314 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 FABP12A6NFH5 140 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 OR4C45A6NMZ5 311 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 IFITM5A6NNB3 132 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 C17orf51A8MQB3 221 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 KIR3DP1A8MWS1 328 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 ZNF878C9JN71 531 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 H3BP45 60 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 H7C1C5 153 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 AIPO00170 330 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 RPP14O95059 124 aaKnown RBP1.95□□□□□ -2.1
SKP1-212ENST00000523966 IGHV3-53P01767 116 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 HLA-AP01891 365 aaKnown RBP1.95□□□□□ -2.1
SKP1-212ENST00000523966 CRHP06850 196 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 CST2P09228 141 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 UCHL1P09936 223 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 OCM2P0CE71 109 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 GABRA1P14867 456 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 HSD11B1P28845 292 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 EVX1P49640 407 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 AP3S2P59780 193 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 LCN6P62502 163 aa1.95□□□□□ -2.1
SKP1-212ENST00000523966 RPS25P62851 125 aaKnown RBP1.95□□□□□ -2.1
SKP1-212ENST00000523966 HBG1P69891 147 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms