RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 PRB4P10163 310 aaPredicted RBP0.36□□□□□ -2.35
PCM1-217ENST00000522998 LINC01554Q52M75 96 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 C1orf137Q5JT78 98 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 GDF5OSQ5U4N7 250 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 TRAPPC6BQ86SZ2 158 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 OR6V1Q8N148 313 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 OR13D1Q8NGV5 346 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 SFT2D1Q8WV19 159 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 C8orf76Q96K31 380 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 C2orf50Q96LR7 162 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 TMEM147Q9BVK8 224 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 RNF122Q9H9V4 155 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 OSTCQ9NRP0 149 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 NHP2Q9NX24 153 aaKnown RBP0.36□□□□□ -2.35
PCM1-217ENST00000522998 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 ZNF462Q96JM2 2506 aa0.36□□□□□ -2.35
PCM1-217ENST00000522998 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 ALPK3Q96L96 1907 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 TRBV6-8A0A0A6YYG3 113 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 FAM236DA0A1B0GTK5 79 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 PIRO00625 290 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 ZNF682O95780 498 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 CRYZL1O95825 349 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 FAM236CP0DP71 79 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 OMPP47874 163 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 YPEL3P61236 119 aaPredicted RBP0.35□□□□□ -2.35
PCM1-217ENST00000522998 RNASE10Q5GAN6 216 aaKnown RBP0.35□□□□□ -2.35
PCM1-217ENST00000522998 KRTAP19-3Q7Z4W3 81 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 C3orf56Q8N813 242 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 OR8J2Q8NGG1 315 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 CT55Q8WUE5 264 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 BORCS7Q96B45 105 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 PARVGQ9HBI0 331 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 ACER3Q9NUN7 267 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 EPDR1Q9UM22 224 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 CYSLTR1Q9Y271 337 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 ZDBF2Q9HCK1 2354 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 PLB1Q6P1J6 1458 aa0.35□□□□□ -2.35
PCM1-217ENST00000522998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.34□□□□□ -2.36
PCM1-217ENST00000522998 hADV38S2A0JD32 116 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 C7orf71A4D174 169 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 SULT1B1O43704 296 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 PROSCO94903 275 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 OR4E1P0C645 316 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 MGST1P10620 155 aaKnown RBP0.34□□□□□ -2.36
PCM1-217ENST00000522998 S100A4P26447 101 aaKnown RBP0.34□□□□□ -2.36
PCM1-217ENST00000522998 MED1Q15648 1581 aaPredicted RBP0.34□□□□□ -2.36
PCM1-217ENST00000522998 RGS21Q2M5E4 152 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 DEFB113Q30KQ7 82 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 C12orf74Q32Q52 190 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 SOSTDC1Q6X4U4 206 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 TRAPPC5Q8IUR0 188 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 ARHGEF28Q8N1W1 1705 aaKnown RBP0.34□□□□□ -2.36
PCM1-217ENST00000522998 GDPD1Q8N9F7 314 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 C4orf3Q8WVX3 66 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 GPR146Q96CH1 333 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 ADAT3Q96EY9 351 aaPredicted RBP0.34□□□□□ -2.36
PCM1-217ENST00000522998 CCDC90BQ9GZT6 254 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 RASL12Q9NYN1 266 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 SLC35A3Q9Y2D2 325 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 SPTBP11277 2137 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 KIF1BO60333 1816 aa0.34□□□□□ -2.36
PCM1-217ENST00000522998 NCOA1Q15788 1441 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 A0A087X0T9 212 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 SMIM9A6NGZ8 99 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 CLDN25C9JDP6 229 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 CASP1P29466 404 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 DEFA1P59665 94 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 AP3S2P59780 193 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 LSM6P62312 80 aaKnown RBP0.33□□□□□ -2.36
PCM1-217ENST00000522998 RANP62826 216 aaKnown RBP0.33□□□□□ -2.36
PCM1-217ENST00000522998 HIST1H3AP68431 136 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 H3F3AP84243 136 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 EDDM3AQ14507 147 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 TSNQ15631 228 aaKnown RBP0.33□□□□□ -2.36
PCM1-217ENST00000522998 LCA10Q71F78 164 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 KRT222Q8N1A0 295 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 Q8N6K4 173 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 TEX47Q8TBZ9 253 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 WFDC5Q8TCV5 224 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 ITFG2Q969R8 447 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 CCDC42Q96M95 316 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 AMELYQ99218 206 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 CMSS1Q9BQ75 279 aaKnown RBP0.33□□□□□ -2.36
PCM1-217ENST00000522998 TMEM133Q9H2Q1 129 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.33□□□□□ -2.36
PCM1-217ENST00000522998 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 PEAK1Q9H792 1746 aa0.33□□□□□ -2.36
PCM1-217ENST00000522998 ZGRF1Q86YA3 2104 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 CITO14578 2027 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 hCG_1818297A0A087WSY0 165 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 A8MT66 165 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 ZNF736B4DX44 427 aaPredicted RBP0.32□□□□□ -2.36
PCM1-217ENST00000522998 RPP14O95059 124 aaKnown RBP0.32□□□□□ -2.36
PCM1-217ENST00000522998 HAND1O96004 215 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 TCRBP04435 133 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 SERPINE1P05121 402 aa0.32□□□□□ -2.36
PCM1-217ENST00000522998 PPIBP23284 216 aaKnown RBP0.32□□□□□ -2.36
PCM1-217ENST00000522998 CEBPGP53567 150 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms