RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 IGHV3-38A0A0C4DH36 116 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 TMEM235A6NFC5 223 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 CYB5BO43169 146 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 BUB3O43684 328 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 IGHV3-30P01768 117 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 IGHV3-33P01772 117 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 IGHV3-30-3P0DP02 117 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 TNFSF8P32971 234 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 CNN1P51911 297 aaKnown RBP4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 CRYBA4P53673 196 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 PPP3R1P63098 170 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 ZNF415Q09FC8 603 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 CIRBPQ14011 172 aaKnown RBP4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 POU2AF1Q16633 256 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 TDRG1Q3Y452 100 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 TIGITQ495A1 244 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 REG3GQ6UW15 175 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 SIGLEC15Q6ZMC9 328 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 OR10J5Q8NHC4 309 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 LSM10Q969L4 123 aaKnown RBP4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 PINX1Q96BK5 328 aaKnown RBP4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 SLC25A39Q9BZJ4 359 aaPredicted RBP4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 TMEM140Q9NV12 185 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 SPATA2Q9UM82 520 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 MRPS7Q9Y2R9 242 aaKnown RBP4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 PRELID3BQ9Y3B1 194 aa4.15□□□□□ -1.75
CTNNA1-216ENST00000519489 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 A0A1W2PPK0 400 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 DAPL1A0PJW8 107 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 TMEM14DPA8MWL7 114 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 K7EQD1 137 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 NDUFAB1O14561 156 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 HRASP01112 189 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 IGHV3-53P01767 116 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 RLN2P04090 185 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 HSD17B1P14061 328 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 ETV6P41212 452 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 SERPINB10P48595 397 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 DAPP51397 102 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 GBX2P52951 348 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 AP2S1P53680 142 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 B2MP61769 119 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 QRFPP83859 136 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 MRPL23Q16540 153 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 SPATA31B1PQ5VZV4 182 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 SDIM1Q6ZPB5 146 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 ZNF493Q6ZR52 646 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 LHFPL3Q86UP9 236 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 Q8N976 141 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 OR1L8Q8NGR8 309 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 BLNKQ8WV28 456 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 C12orf4Q9NQ89 552 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 MRGBPQ9NV56 204 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 PLEKHJ1Q9NW61 149 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 TAS2R8Q9NYW2 309 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 GHRLQ9UBU3 117 aa4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 RBM7Q9Y580 266 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-216ENST00000519489 A0A087WYN8 130 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 H7C1H1 209 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 EDF1O60869 148 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 HNRNPCP07910 306 aaKnown RBP eCLIP4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 ATP6V1E1P36543 226 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 PSMB3P49720 205 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 RPS11P62280 158 aaKnown RBP eCLIP4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 PRCDQ00LT1 54 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 DHODHQ02127 395 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 C21orf62-AS1Q17RA5 79 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 CT83Q5H943 113 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 PLAC9Q5JTB6 97 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 EBLN2Q6P2I7 272 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 SPINK6Q6UWN8 80 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 HSD17B13Q7Z5P4 300 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 MS4A15Q8N5U1 240 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 OR52E5Q8NH55 327 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 ARHGAP5-AS1Q96IT6 56 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 TM2D2Q9BX73 214 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 TEX12Q9BXU0 123 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 LPAR5Q9H1C0 372 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 KCNK7Q9Y2U2 307 aa4.13□□□□□ -1.75
CTNNA1-216ENST00000519489 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 TRBV5-5A0A0J9YX44 114 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 TNFSF12O43508 249 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 HLA-DQB1P01920 261 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 CHTF8P0CG12 524 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 DCKP27707 260 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 CALRP27797 417 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 POLR2IP36954 125 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 NPBWR1P48145 328 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 EIF2B2P49770 351 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 THOC7Q6I9Y2 204 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 Q6ZNX1 250 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 OR6F1Q8NGZ6 308 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 COQ8AQ8NI60 647 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 PECRQ9BY49 303 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 EFCAB1Q9HAE3 211 aa4.12□□□□□ -1.75
CTNNA1-216ENST00000519489 IMPAD1Q9NX62 359 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms