RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 OR8A1Q8NGG7 326 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 ZNF502Q8TBZ5 544 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 SLC25A2Q9BXI2 301 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 CYSLTR1Q9Y271 337 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 PTPRBP23467 1997 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 SPEGQ15772 3267 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 TRAV5A0A0B4J249 113 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 TRBV7-9A0A0J9YWB2 115 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 FCGR3BO75015 233 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 ZFAND5O76080 213 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 KIR2DL2P43627 348 aaPredicted RBP11□□□□□ -0.65
PABPC1-208ENST00000519004 CSN1S1P47710 185 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 NMUP48645 174 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 PRSS22Q9GZN4 317 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 CDH23Q9H251 3354 aa11□□□□□ -0.65
PABPC1-208ENST00000519004 CT45A6P0DMU7 189 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 CT45A5P0DMU8 189 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 CT45A7P0DMV0 189 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 HCFC1P51610 2035 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 CT45A1Q5HYN5 189 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 MOB3BQ86TA1 216 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 CT45A3Q8NHU0 189 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 PRRG4Q9BZD6 226 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 ACP1P24666 158 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 CACNG7P62955 275 aa10.99□□□□□ -0.65
PABPC1-208ENST00000519004 IGLL5B9A064 214 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 FAM106CPP0CH98 169 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 ERVK11-1P61568 191 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 GNG5P63218 68 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 FAM106AQ4KMX7 169 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 CT83Q5H943 113 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 RBPMS2Q6ZRY4 209 aaKnown RBP10.98□□□□□ -0.65
PABPC1-208ENST00000519004 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 IGHV3-43A0A0B4J1X8 118 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 TCRBV4S1A1TA0A5B7 111 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 TMEM30CPA0ZSE6 113 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 SRRM4A7MD48 611 aaKnown RBP10.98□□□□□ -0.65
PABPC1-208ENST00000519004 C16orf97H3BN30 126 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 PSPNO60542 156 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 PROP1O75360 226 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 BRI3O95415 125 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 IGHV3-43DP0DP04 118 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 GAGE5Q13069 117 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 GAGE6Q13070 117 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 KLRD1Q13241 179 aa10.98□□□□□ -0.65
PABPC1-208ENST00000519004 C10orf142B7Z368 130 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 MT-CO3P00414 261 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 LIFP15018 202 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 LOXL1Q08397 574 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-208ENST00000519004 FHL3Q13643 280 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 GAGE13Q4V321 117 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 WDR86Q86TI4 376 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 TM2D2Q9BX73 214 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 TMEM140Q9NV12 185 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 NHP2Q9NX24 153 aaKnown RBP10.97□□□□□ -0.65
PABPC1-208ENST00000519004 HIGD1BQ9P298 99 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 C19orf71A6NCJ1 209 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 OOEPA6NGQ2 149 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 PYYP10082 97 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 XGP55808 180 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 DSCR4P56555 118 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-208ENST00000519004 ZNF146Q15072 292 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 AMTNQ6UX39 209 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 Q6ZUT4 128 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 OSR1Q8TAX0 266 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-208ENST00000519004 SGK494Q96LW2 274 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 MLST8Q9BVC4 326 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 GFRA4Q9GZZ7 299 aa10.97□□□□□ -0.65
PABPC1-208ENST00000519004 IGLV3-12A0A075B6K2 115 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 hADV38S2A0JD32 116 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 DEFB108AA8MXU0 73 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 NPIPB6E9PJ23 425 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 LTAP01374 205 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 IGHV3-9P01782 118 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 SSBP2P81877 361 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-208ENST00000519004 CFHR1Q03591 330 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 RPRMLQ8N4K4 120 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 CACNG8Q8WXS5 425 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 CHAC1Q9BUX1 264 aa10.96□□□□□ -0.65
PABPC1-208ENST00000519004 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.65
PABPC1-208ENST00000519004 ZNF503-AS2A6NEH8 195 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 OVOL3O00110 214 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 HAX1O00165 279 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 ERVK-16P61578 105 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 FOXI1Q12951 378 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 OR1C1Q15619 314 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 ITLN1Q8WWA0 313 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 PROK2Q9HC23 129 aa10.96□□□□□ -0.66
PABPC1-208ENST00000519004 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 K7EMI3 77 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 P01737 135 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 FAM234AQ9H0X4 552 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 ADAMTS20P59510 1910 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 A0A096LPE4 126 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 A0A1W2PPZ6 126 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 B5MCH6 92 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 DNPH1O43598 174 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 APOMO95445 188 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 LTBRP36941 435 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms