RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 SIP14410 1827 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 FANCD2Q9BXW9 1451 aa0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 SNRNP200O75643 2136 aaKnown RBP0.22□□□□□ -2.37
SCARNA1-201ENST00000517138 KDM6AO15550 1401 aaPredicted RBP0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 XRN1Q8IZH2 1706 aaKnown RBP0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 LRRIQ1Q96JM4 1722 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 PARP4Q9UKK3 1724 aaKnown RBP0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 MROH2AA6NES4 1674 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 ABCC8Q09428 1581 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 DAPL1A0PJW8 107 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 TMEM212A6NML5 194 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 LINC00614P0C842 121 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 HIST1H4AP62805 103 aaKnown RBP0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 FABP5Q01469 135 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 C9orf64Q5T6V5 341 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 SLC22A24Q8N4F4 322 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 OR8B3Q8NGG8 313 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 OR52E4Q8NGH9 312 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 METTL9Q9H1A3 318 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 PHIPQ8WWQ0 1821 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 ATP7AQ04656 1500 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 UHRF1BP1LA0JNW5 1464 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 A2ML1A8K2U0 1454 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 CLIP1P30622 1438 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 ALS2Q96Q42 1657 aa0.21□□□□□ -2.38
SCARNA1-201ENST00000517138 DNAH8Q96JB1 4490 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 MAP3K19Q56UN5 1328 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 MAST2Q6P0Q8 1798 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 SYCP1Q15431 976 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 ACOT12Q8WYK0 555 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 OBSCN-AS1Q96MR7 158 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 NSRP1Q9H0G5 558 aaKnown RBP0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 DDX60LQ5H9U9 1706 aaKnown RBP0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 CCDC18Q5T9S5 1454 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 NLRP1Q9C000 1473 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 MYLKQ15746 1914 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 HFM1A2PYH4 1435 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 CCDC180Q9P1Z9 1646 aa0.2□□□□□ -2.38
SCARNA1-201ENST00000517138 AGLP35573 1532 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 ERICH3Q5RHP9 1530 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 FLGP20930 4061 aaPredicted RBP0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 ZNHIT3Q15649 155 aaPredicted RBP0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 CLEC12BQ2HXU8 276 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 LRRC26Q2I0M4 334 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 FAM45BPQ6NSW5 357 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 COPS6Q7L5N1 327 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 SIKE1Q9BRV8 207 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 AGPAT3Q9NRZ7 376 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 TIMM22Q9Y584 194 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 PTPRGP23470 1445 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 LAMB1P07942 1786 aa0.19□□□□□ -2.38
SCARNA1-201ENST00000517138 CEP152O94986 1710 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 LMO7Q8WWI1 1683 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 EIF2AK4Q9P2K8 1649 aaKnown RBP0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 ATP8B1O43520 1251 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 NSA2O95478 260 aaKnown RBP0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 IVLP07476 585 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 RD3LP0DJH9 198 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 HIST1H1CP16403 213 aaKnown RBP0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 RPL30P62888 115 aaKnown RBP0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 JOSD1Q15040 202 aaPredicted RBP0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 FBXO48Q5FWF7 155 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 TEX36Q5VZQ5 186 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 ATP6V1C2Q8NEY4 427 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 GOLGA4Q13439 2230 aaKnown RBP0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 C4AP0C0L4 1744 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 SCN7AQ01118 1682 aa0.18□□□□□ -2.38
SCARNA1-201ENST00000517138 ARHGAP35Q9NRY4 1499 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 DLEC1Q9Y238 1755 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 USF3Q68DE3 2245 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 BCL9O00512 1426 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 COX7A2LO14548 114 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 APOA1P02647 267 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 MSNP26038 577 aaKnown RBP0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 SLCO1A2P46721 670 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 HLA-DRB3P79483 266 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 AKR1C1Q04828 323 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 ANGPT1Q15389 498 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 HLA-DRB5Q30154 266 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 DHFR2Q86XF0 187 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 SBSPONQ8IVN8 264 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 SPERTQ8NA61 448 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 TRABDQ9H4I3 376 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 MYO5CQ9NQX4 1742 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 ESPL1Q14674 2120 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 NUP98P52948 1817 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 USP54Q70EL1 1684 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 ASCC3Q8N3C0 2202 aaKnown RBP0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 UNC13CQ8NB66 2214 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 CEP192Q8TEP8 1941 aa0.17□□□□□ -2.38
SCARNA1-201ENST00000517138 UBR3Q6ZT12 1888 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 TANC1Q9C0D5 1861 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 CDC42BPAQ5VT25 1732 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 C9orf84Q5VXU9 1444 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 LOC100506127A0A0U1RQW1 187 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 KDELR2P33947 212 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 CIRBPQ14011 172 aaKnown RBP0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 Q3ZCU0 254 aa0.16□□□□□ -2.38
SCARNA1-201ENST00000517138 SMIM5Q71RC9 77 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms