RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 HLA-DQA1P01909 254 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 MPTX1A8MV57 137 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 TFF3Q07654 80 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 LINC00477Q96M19 166 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 KLK15Q9H2R5 256 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 TRIOBPQ9H2D6 2365 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 PHOX2AO14813 284 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 MEF2BQ02080 365 aaPredicted RBP6.1□□□□□ -1.43
CCDC30-214ENST00000514642 PRELID3AQ96N28 172 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 ATP6V0E1O15342 81 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 PSG1P11464 419 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 C1QL4Q86Z23 238 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 NPDC1Q9NQX5 325 aaPredicted RBP6.1□□□□□ -1.43
CCDC30-214ENST00000514642 IGHV4-30-2A0A087WSY4 118 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 H3BUA1 57 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 TOMM40O96008 361 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 SOD3P08294 240 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 HOXB4P17483 251 aaPredicted RBP6.1□□□□□ -1.43
CCDC30-214ENST00000514642 NUDT11Q96G61 164 aa6.1□□□□□ -1.43
CCDC30-214ENST00000514642 F11RQ9Y624 299 aaKnown RBP6.1□□□□□ -1.43
CCDC30-214ENST00000514642 URB1O60287 2271 aaKnown RBP6.1□□□□□ -1.43
CCDC30-214ENST00000514642 FGF16O43320 207 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 FBLN7Q53RD9 439 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 TEX36Q5VZQ5 186 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 C10orf105Q8TEF2 133 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 NXT2Q9NPJ8 142 aaKnown RBP6.09□□□□□ -1.43
CCDC30-214ENST00000514642 ZNF256Q9Y2P7 627 aaPredicted RBP6.09□□□□□ -1.43
CCDC30-214ENST00000514642 CCDC88CQ9P219 2028 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 FCN3O75636 299 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 IGLV1-44P01699 117 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 RPL29P47914 159 aaKnown RBP6.09□□□□□ -1.43
CCDC30-214ENST00000514642 DEFB131AP59861 70 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 FOXB2Q5VYV0 432 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 RAMP3O60896 148 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 STAG3L2P0CL84 134 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 HBBP68871 147 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 ZNF880Q6PDB4 577 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 OR4D5Q8NGN0 318 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 SELENOKQ9Y6D0 94 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 PCM1Q15154 2024 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 TRAV34A0A0B4J273 112 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 OVOL3O00110 214 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 CCL24O00175 119 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 SLC25A20O43772 301 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 CGAP01215 116 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 IFI27P40305 119 aaPredicted RBP6.09□□□□□ -1.43
CCDC30-214ENST00000514642 NDPQ00604 133 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 MIR17HGQ75NE6 70 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 TRGV9Q99603 122 aa6.09□□□□□ -1.43
CCDC30-214ENST00000514642 SOX21Q9Y651 276 aaPredicted RBP6.09□□□□□ -1.43
CCDC30-214ENST00000514642 ARID1BQ8NFD5 2236 aaPredicted RBP6.09□□□□□ -1.44
CCDC30-214ENST00000514642 APOMO95445 188 aa6.09□□□□□ -1.44
CCDC30-214ENST00000514642 CD8AP01732 235 aa6.09□□□□□ -1.44
CCDC30-214ENST00000514642 PLA2G2AP14555 144 aa6.09□□□□□ -1.44
CCDC30-214ENST00000514642 SRSF4Q08170 494 aaKnown RBP6.09□□□□□ -1.44
CCDC30-214ENST00000514642 JOSD1Q15040 202 aaPredicted RBP6.09□□□□□ -1.44
CCDC30-214ENST00000514642 CENPWQ5EE01 88 aa6.09□□□□□ -1.44
CCDC30-214ENST00000514642 OR11H7Q8NGC8 314 aa6.09□□□□□ -1.44
CCDC30-214ENST00000514642 RPP21Q9H633 154 aaKnown RBP6.09□□□□□ -1.44
CCDC30-214ENST00000514642 LINC00862A6NCI5 91 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 DEFB130BP0DP73 79 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 DEFB130AP0DP74 79 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 GRNP28799 593 aaKnown RBP6.08□□□□□ -1.44
CCDC30-214ENST00000514642 RPL15P61313 204 aaKnown RBP6.08□□□□□ -1.44
CCDC30-214ENST00000514642 EFNB1P98172 346 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 AWAT1Q58HT5 328 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 PNRC2Q9NPJ4 139 aaKnown RBP6.08□□□□□ -1.44
CCDC30-214ENST00000514642 A0A1B0GVG6 124 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 M0R143 59 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 VAMP3Q15836 100 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 SPATA31B1PQ5VZV4 182 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 FBLN5Q9UBX5 448 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 CKAP5Q14008 2032 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 TRBV9A0A0B4J1U6 114 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 IGKV1-9A0A0C4DH69 117 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 IGHV3-53P01767 116 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 Q6P435 159 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 OR10AG1Q8NH19 301 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 PROK2Q9HC23 129 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 GRIFINA4D1Z8 144 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 LHFPL4Q7Z7J7 247 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 TMEM183AQ8IXX5 376 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 OR10W1Q8NGF6 305 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 SCGB3A1Q96QR1 104 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 ZNF815PA8K554 130 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 VENTXO95231 258 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 GCSAMLQ5JQS6 135 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 RIPPLY3P57055 190 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 CKS1BP61024 79 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 ZNF562Q6V9R5 426 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 Q8NFD4 153 aa6.08□□□□□ -1.44
CCDC30-214ENST00000514642 TGIF2-C20orf24A0A0A6YYL0 155 aa6.07□□□□□ -1.44
CCDC30-214ENST00000514642 TRAV12-3A0A0B4J271 114 aa6.07□□□□□ -1.44
CCDC30-214ENST00000514642 ITGB1BP1O14713 200 aa6.07□□□□□ -1.44
CCDC30-214ENST00000514642 IGHV4-39P01824 125 aa6.07□□□□□ -1.44
CCDC30-214ENST00000514642 SRIP30626 198 aa6.07□□□□□ -1.44
CCDC30-214ENST00000514642 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
CCDC30-214ENST00000514642 STPG2Q8N412 459 aa6.07□□□□□ -1.44
CCDC30-214ENST00000514642 FAM24BQ8N5W8 94 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms