RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 CLVS1Q8IUQ0 354 aaPredicted RBP0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 KRT222Q8N1A0 295 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 HIST3H2BBQ8N257 126 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 SIGLECL1Q8N7X8 197 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR5A1Q8NGJ0 315 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 LINC00526Q96FQ7 95 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 GINS4Q9BRT9 223 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 RNF122Q9H9V4 155 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 UQCC1Q9NVA1 299 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 KLK9Q9UKQ9 250 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 CYSLTR1Q9Y271 337 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 ERGIC3Q9Y282 383 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 CCDC88AQ3V6T2 1871 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 PIK3C2GO75747 1445 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 RIC1Q4ADV7 1423 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 PLXND1Q9Y4D7 1925 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 J3QRK9 145 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR2B3O76000 313 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 IFNA6P05013 189 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 BAALC-AS2P0C853 105 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 MIFP14174 115 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 S100A4P26447 101 aaKnown RBP0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 CASP1P29466 404 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 HOXA6P31267 233 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 DEFA1P59665 94 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 REEP5Q00765 189 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 RHEBQ15382 184 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 LINC01554Q52M75 96 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 KHDC3LQ587J8 217 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 Q6Q795 121 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 PHF13Q86YI8 300 aaPredicted RBP0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 SBSPONQ8IVN8 264 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR4E2Q8NGC2 313 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR52L1Q8NGH7 329 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR51A2Q8NGJ7 313 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 DNAJC9Q8WXX5 260 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 CHMP6Q96FZ7 201 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 BTF3L4Q96K17 158 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 SIGMAR1Q99720 223 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 RNASE7Q9H1E1 156 aaKnown RBP0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 NMNAT1Q9HAN9 279 aaPredicted RBP0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 PARVBQ9HBI1 364 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 OSTCQ9NRP0 149 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 C14orf105Q9NVL8 296 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 NHP2Q9NX24 153 aaKnown RBP0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 TAS2R4Q9NYW5 299 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 TVP23BQ9NYZ1 205 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 ANAPC1Q9H1A4 1944 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 SCN10AQ9Y5Y9 1956 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 SCN3AQ9NY46 2000 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 RTL1A6NKG5 1358 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 CCDC144AA2RUR9 1427 aa0.53□□□□□ -2.32
TRAPPC11-210ENST00000513600 UNC13CQ8NB66 2214 aa0.53□□□□□ -2.33
TRAPPC11-210ENST00000513600 HECW2Q9P2P5 1572 aa0.53□□□□□ -2.33
TRAPPC11-210ENST00000513600 ZNF106Q9H2Y7 1883 aaKnown RBP0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 IGKV1D-42A0A075B6H8 117 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 C7orf71A4D174 169 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR2T1O43869 369 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 CST2P09228 141 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 CRYGAP11844 174 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 SPI1P17947 270 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 FKBP2P26885 142 aaKnown RBP0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 MRPS25P82663 173 aaKnown RBP0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 LIN52Q52LA3 116 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 LCA10Q71F78 164 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR11H6Q8NGC7 330 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR52R1Q8NGF1 315 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 GNPDA2Q8TDQ7 276 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 ITFG2Q969R8 447 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 SLC50A1Q9BRV3 221 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 KIFC1Q9BW19 673 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 EPDR1Q9UM22 224 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 ARL2BPQ9Y2Y0 163 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 STRCQ7RTU9 1775 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 EML6Q6ZMW3 1958 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 TNRC6AQ8NDV7 1962 aaKnown RBP0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 FREM3P0C091 2139 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 TET1Q8NFU7 2136 aa0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 HEATR1Q9H583 2144 aaKnown RBP0.52□□□□□ -2.33
TRAPPC11-210ENST00000513600 LOC110117498A0A087WWA1 95 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 A0A087X0T9 212 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 FAM159BA6NKW6 160 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR1I1O60431 355 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR4E1P0C645 316 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 ASAH2BP0C7U1 165 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 SMIM17P0DL12 118 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 HSD11B1P28845 292 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 ERP29P30040 261 aaKnown RBP0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 MYH10P35580 1976 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 CAPZBP47756 277 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 MRPS15P82914 257 aaKnown RBP0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 PDE6HQ13956 83 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 TMED2Q15363 201 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 TSNQ15631 228 aaKnown RBP0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 LINC00311Q8N616 119 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR8D4Q8NGM9 314 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 OR13D1Q8NGV5 346 aa0.51□□□□□ -2.33
TRAPPC11-210ENST00000513600 SLC25A40Q8TBP6 338 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms