RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 MEIS3P1A6NDR6 274 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 RPL5P46777 297 aaKnown RBP7.64□□□□□ -1.19
DDX41-216ENST00000513562 SUB1P53999 127 aaKnown RBP eCLIP7.64□□□□□ -1.19
DDX41-216ENST00000513562 XGP55808 180 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 SCAND1P57086 179 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 USF2Q15853 346 aaPredicted RBP7.64□□□□□ -1.19
DDX41-216ENST00000513562 MLANAQ16655 118 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 PHLDA2Q53GA4 152 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 TTC32Q5I0X7 151 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 FOXI2Q6ZQN5 318 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 SLC35G3Q8N808 338 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 SLC35B3Q9H1N7 401 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 VCXQ9H320 206 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 ANAPC10Q9UM13 185 aa7.64□□□□□ -1.19
DDX41-216ENST00000513562 RRP15Q9Y3B9 282 aaKnown RBP7.64□□□□□ -1.19
DDX41-216ENST00000513562 HMCN2Q8NDA2 5059 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 RPS10-NUDT3A0A1W2PQS6 291 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 LYRM9A8MSI8 78 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 BUB3O43684 328 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 NUDT3O95989 172 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 IGLC1P0CG04 106 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 ZNF79Q15937 498 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 TBC1D26Q86UD7 250 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 OR1S2Q8NGQ3 325 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 OR5H6Q8NGV6 325 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 Q8WTZ3 238 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 FRZBQ92765 325 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 C18orf15Q96N68 181 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 C7orf50Q9BRJ6 194 aaKnown RBP7.63□□□□□ -1.19
DDX41-216ENST00000513562 Q9H3A6 140 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 Q9H8V8 135 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 SCPEP1Q9HB40 452 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 IFT46Q9NQC8 304 aa7.63□□□□□ -1.19
DDX41-216ENST00000513562 TXNL4BQ9NX01 149 aaKnown RBP7.63□□□□□ -1.19
DDX41-216ENST00000513562 GSTZ1O43708 216 aaPredicted RBP7.62□□□□□ -1.19
DDX41-216ENST00000513562 PMP2P02689 132 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 P0C879 139 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 YPEL3P61236 119 aaPredicted RBP7.62□□□□□ -1.19
DDX41-216ENST00000513562 PSG9Q00887 426 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 DHODHQ02127 395 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 IZUMO4Q1ZYL8 232 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 BSXQ3C1V8 233 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 SSX7Q7RTT5 188 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 OR4B1Q8NGF8 309 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 DIABLOQ9NR28 239 aa7.62□□□□□ -1.19
DDX41-216ENST00000513562 A0A0B4J293 547 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 A0A1W2PPQ1 181 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 F5H768 121 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 IGKV1-5P01602 117 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 IL4P05112 153 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 S100GP29377 79 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 PSMB3P49720 205 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 RORCP51449 518 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 PAX9P55771 341 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 TAS2R46P59540 309 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 SPATA31B1PQ5VZV4 182 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 OR5H2Q8NGV7 314 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 OR6F1Q8NGZ6 308 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 RNF141Q8WVD5 230 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 LINC00052Q96N35 136 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 WDR12Q9GZL7 423 aaKnown RBP7.61□□□□□ -1.19
DDX41-216ENST00000513562 MAGT1Q9H0U3 335 aa7.61□□□□□ -1.19
DDX41-216ENST00000513562 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
DDX41-216ENST00000513562 SOCS3O14543 225 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 DEFB130BP0DP73 79 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 DEFB130AP0DP74 79 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 NAT1P18440 290 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 OR10J1P30954 320 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 HSPA13P48723 471 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 RND2P52198 227 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 TAS2R20P59543 309 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 CLINT1Q14677 625 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 FAM78BQ5VT40 261 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 LPCAT3Q6P1A2 487 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 PRSS54Q6PEW0 395 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 PTTG2Q9NZH5 202 aa7.6□□□□□ -1.19
DDX41-216ENST00000513562 F6UB75 175 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 ATP5G1P05496 136 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 SLC25A4P12235 298 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 PSMB9P28065 219 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 TSPOP30536 169 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 SDC2P34741 201 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 ID1P41134 155 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 ETV6P41212 452 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 ATP5G3P48201 142 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 AQP4P55087 323 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 DLK1P80370 383 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 COQ8AQ8NI60 647 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 IGF2BP2-AS1Q96M15 143 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 UPK3BQ9BT76 320 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 TMEM208Q9BTX3 173 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 PDCD10Q9BUL8 212 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 ENY2Q9NPA8 101 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 PGPEP1Q9NXJ5 209 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 KLK11Q9UBX7 282 aa7.59□□□□□ -1.19
DDX41-216ENST00000513562 A0A0J9YX75 114 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 PLAC8L1A1L4L8 177 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 A8MTW9 85 aa7.58□□□□□ -1.2
DDX41-216ENST00000513562 M0QYG6 137 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms