RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 MRPL36Q9P0J6 103 aaKnown RBP7.41□□□□□ -1.22
CPNE4-210ENST00000512332 APC2O95996 2303 aa7.41□□□□□ -1.22
CPNE4-210ENST00000512332 IGHV1-3A0A0C4DH29 117 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 A0A1B0GUS0 222 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 GRIFINA4D1Z8 144 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 IZUMO1RA6ND01 250 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 C22orf46C9J442 243 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 PEX7O00628 323 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 ENSAO43768 121 aaKnown RBP7.4□□□□□ -1.22
CPNE4-210ENST00000512332 HLA-DQA1P01909 254 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 PYYP10082 97 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 TMEM183BQ1AE95 376 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 C1orf194Q5T5A4 169 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 LINC00469Q8N7U9 141 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 WIPF2Q8TF74 440 aaPredicted RBP7.4□□□□□ -1.22
CPNE4-210ENST00000512332 TMEM190Q8WZ59 177 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 MBD6Q96DN6 1003 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 SRSF8Q9BRL6 282 aaKnown RBP7.4□□□□□ -1.22
CPNE4-210ENST00000512332 CHRDL1Q9BU40 450 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 NAGKQ9UJ70 344 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 KLF12Q9Y4X4 402 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 INSIG2Q9Y5U4 225 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 PKDREJQ9NTG1 2253 aa7.4□□□□□ -1.22
CPNE4-210ENST00000512332 SERF1AO75920 110 aa7.4□□□□□ -1.23
CPNE4-210ENST00000512332 SCGB1D1O95968 90 aa7.4□□□□□ -1.23
CPNE4-210ENST00000512332 AMY1AP04745 511 aa7.4□□□□□ -1.23
CPNE4-210ENST00000512332 MFAP2P55001 183 aa7.4□□□□□ -1.23
CPNE4-210ENST00000512332 PPP1R27Q86WC6 154 aa7.4□□□□□ -1.23
CPNE4-210ENST00000512332 BAGE2Q86Y30 109 aa7.4□□□□□ -1.23
CPNE4-210ENST00000512332 NAT8BQ9UHF3 227 aa7.4□□□□□ -1.23
CPNE4-210ENST00000512332 LY6LH3BQJ8 138 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 HYPMO75409 117 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 FRMD6-AS1P0C7T7 363 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 MGST1P10620 155 aaKnown RBP7.39□□□□□ -1.23
CPNE4-210ENST00000512332 FXYD3Q14802 87 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 TNXAQ16473 311 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 UNQ6494/PRO21346Q6UXR6 183 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 BAGE3Q86Y29 109 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 MUC15Q8N387 334 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 EPDR1Q9UM22 224 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 F11RQ9Y624 299 aaKnown RBP7.39□□□□□ -1.23
CPNE4-210ENST00000512332 POLEQ07864 2286 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 IGHV3-72A0A0B4J1Y9 119 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 KIR2DL5BA0A0G2JN68 375 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 KIR2DL5BA0A0G2JPC4 375 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 REG1AP05451 166 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 BRS3P32247 399 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 HCP5Q6MZN7 132 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 KIR2DL5AQ8N109 375 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 LY6G5BQ8NDX9 201 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 MISP3Q96FF7 219 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 GRAMD2BQ96HH9 432 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 LINC00479Q96M42 142 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
CPNE4-210ENST00000512332 PPIAL4CA0A0B4J2A2 164 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 TEX22C9J3V5 150 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 IGHV3-48P01763 117 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 NBEAP1P0C6P0 100 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 PPIAL4GP0DN37 164 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 ORM2P19652 201 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 CA7P43166 264 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 FOXC1Q12948 553 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 Q6ZWC4 215 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 C7orf69Q9H7B7 122 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 GNB4Q9HAV0 340 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 SERTAD4Q9NUC0 356 aa7.38□□□□□ -1.23
CPNE4-210ENST00000512332 PLAUP00749 431 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 GPX1P07203 203 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 HIST1H1EP10412 219 aaKnown RBP7.37□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF672Q499Z4 452 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-210ENST00000512332 NUDT10Q8NFP7 164 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 OR1B1Q8NGR6 318 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 RPEQ96AT9 228 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 NUDT11Q96G61 164 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 GPR82Q96P67 336 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 RBM14Q96PK6 669 aaKnown RBP7.37□□□□□ -1.23
CPNE4-210ENST00000512332 MLST8Q9BVC4 326 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 SCNM1Q9BWG6 230 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-210ENST00000512332 POLR3KQ9Y2Y1 108 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-210ENST00000512332 LAMA5O15230 3695 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 MALRD1Q5VYJ5 2156 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 MUC6Q6W4X9 2439 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 BMPR1BO00238 502 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 LIPFP07098 398 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 GP9P14770 177 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 CNTFRP26992 372 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 USF2Q15853 346 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-210ENST00000512332 TPTE2P1Q5T6R2 138 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 RUSC1-AS1Q66K80 236 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 C5orf17Q8NAS9 161 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 LINC01560Q8TB33 94 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 TSKUQ8WUA8 353 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 FAM168AQ92567 244 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 ATG101Q9BSB4 218 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 TMEM14CQ9P0S9 112 aa7.37□□□□□ -1.23
CPNE4-210ENST00000512332 PLXNB1O43157 2135 aa7.36□□□□□ -1.23
CPNE4-210ENST00000512332 PGPA6NDG6 321 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms