RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
PTPN20-221ENST00000509599 VSIG2Q96IQ7 327 aa6.33□□□□□ -1.4
PTPN20-221ENST00000509599 TMEM56Q96MV1 263 aa6.33□□□□□ -1.4
PTPN20-221ENST00000509599 LINC00052Q96N35 136 aa6.33□□□□□ -1.4
PTPN20-221ENST00000509599 ABHD1Q96SE0 405 aa6.33□□□□□ -1.4
PTPN20-221ENST00000509599 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
PTPN20-221ENST00000509599 MRPL36Q9P0J6 103 aaKnown RBP6.33□□□□□ -1.4
PTPN20-221ENST00000509599 CLEC2DQ9UHP7 191 aa6.33□□□□□ -1.4
PTPN20-221ENST00000509599 TRAV9-2A0A087WT02 112 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 A8MTW9 85 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 IGLV2-8P01709 118 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 LINC01620Q4KN68 170 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 SIGLEC15Q6ZMC9 328 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 AMIGO2Q86SJ2 522 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 LINC00612Q8N6U2 182 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 OR56B1Q8NGI3 324 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 OR10J6PQ8NGY7 276 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
PTPN20-221ENST00000509599 PLEKHA2Q9HB19 425 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 NOP10Q9NPE3 64 aaKnown RBP6.32□□□□□ -1.4
PTPN20-221ENST00000509599 TIMM8BQ9Y5J9 83 aaPredicted RBP6.32□□□□□ -1.4
PTPN20-221ENST00000509599 LY96Q9Y6Y9 160 aa6.32□□□□□ -1.4
PTPN20-221ENST00000509599 A0A0J9YX75 114 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 IGKV1-17P01599 117 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 HNRNPCP07910 306 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPN20-221ENST00000509599 ELK1P19419 428 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 SPATA31B1PQ5VZV4 182 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 TMEM230Q96A57 120 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 RAB3CQ96E17 227 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 CENPOQ9BU64 300 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 CCL28Q9NRJ3 127 aa6.31□□□□□ -1.4
PTPN20-221ENST00000509599 M0R2Z0 102 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 PSCAO43653 123 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 INSP01308 110 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 MAPK3P27361 379 aaPredicted RBP6.3□□□□□ -1.4
PTPN20-221ENST00000509599 B2MP61769 119 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 ST3GAL4Q11206 333 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 SPINK13Q1W4C9 94 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 Q6ZRU5 148 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 BAP18Q8IXM2 172 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 RHOXF1Q8NHV9 184 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 PHYHIPQ92561 330 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 GFI1Q99684 422 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 DNAJC4Q9NNZ3 241 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 COMMD9Q9P000 198 aa6.3□□□□□ -1.4
PTPN20-221ENST00000509599 A0A075B6Q4 140 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 SOCS3O14543 225 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 BUB3O43684 328 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 CLN5O75503 358 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 PSMB3P49720 205 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 CLDN12P56749 244 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 ERVK-16P61578 105 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 WFDC2Q14508 124 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 ZIK1Q3SY52 487 aaPredicted RBP6.29□□□□□ -1.4
PTPN20-221ENST00000509599 TIGITQ495A1 244 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 COQ8AQ8NI60 647 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 SECTM1Q8WVN6 248 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 APH1BQ8WW43 257 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 C16orf74Q96GX8 76 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 FAM107BQ9H098 131 aa6.29□□□□□ -1.4
PTPN20-221ENST00000509599 ELF5Q9UKW6 265 aaPredicted RBP6.29□□□□□ -1.4
PTPN20-221ENST00000509599 A0A0U1RQV1 116 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 K7EP13 123 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 SLC17A2O00624 439 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 SNAPC5O75971 98 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 CTXN2P0C2S0 81 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 HIST1H1DP16402 221 aaKnown RBP6.28□□□□□ -1.4
PTPN20-221ENST00000509599 CATR1Q13166 79 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 MSMO1Q15800 293 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 TPRA1Q86W33 373 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 WFDC10BQ8IUB3 73 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 CMTM1Q8IZ96 169 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 LRTM2Q8N967 370 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 OR51H1Q8NH63 302 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 LGALS14Q8TCE9 139 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 RNASE8Q8TDE3 154 aaKnown RBP6.28□□□□□ -1.4
PTPN20-221ENST00000509599 GPR146Q96CH1 333 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 PLGRKTQ9HBL7 147 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 DOK5Q9P104 306 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 PRNDQ9UKY0 176 aa6.28□□□□□ -1.4
PTPN20-221ENST00000509599 TRAV12-2A0A075B6T6 113 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 TMEM272A0A1B0GTI8 110 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 GAGE12BA1L429 117 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 GAGE7O76087 117 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 KRASP01116 189 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 IGLV2-11P01706 119 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 ALPLP05186 524 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 GAGE12FP0CL80 117 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 GAGE12GP0CL81 117 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 GAGE12IP0CL82 117 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 HTN1P15515 57 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 EVI2AP22794 236 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 G6PCP35575 357 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 TALDO1P37837 337 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 ID1P41134 155 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 LYPD5Q6UWN5 251 aa6.27□□□□□ -1.41
PTPN20-221ENST00000509599 TMEM144Q7Z5S9 345 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms