RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 DEFB123Q8N688 67 aa11.67□□□□□ -0.54
TRIM41-204ENST00000508930 SPRR3Q9UBC9 169 aa11.67□□□□□ -0.54
TRIM41-204ENST00000508930 IGHV1-24A0A0C4DH33 117 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 C21orf140B9A014 251 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 H3BTX0 84 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 PPBPP02775 128 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 ZNF329Q86UD4 541 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 DEFB125Q8N687 156 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 DDB2Q92466 427 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 RPP21Q9H633 154 aaKnown RBP11.66□□□□□ -0.54
TRIM41-204ENST00000508930 HSPB8Q9UJY1 196 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 F2RL2O00254 374 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 DLL1O00548 723 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 C2orf83Q53S99 150 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 CACNA1HO95180 2353 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 VPS13AQ96RL7 3174 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 GPR183P32249 361 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 ARF6P62330 175 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 MBD6Q96DN6 1003 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 HARBI1Q96MB7 349 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 MEGF9Q9H1U4 602 aa11.66□□□□□ -0.54
TRIM41-204ENST00000508930 OR5AL1P0C617 328 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
TRIM41-204ENST00000508930 GCSAMQ8N6F7 178 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 TMEM105Q8N8V8 129 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 OR1B1Q8NGR6 318 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 OR1L8Q8NGR8 309 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 CHCHD1Q96BP2 118 aaKnown RBP11.65□□□□□ -0.54
TRIM41-204ENST00000508930 FAM167A-AS1Q96KT0 104 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 ZPBPQ9BS86 351 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 ZNF430Q9H8G1 570 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-204ENST00000508930 SRRM5B3KS81 715 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 PPIAL4DF5H284 164 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 IGKV1-16P04430 117 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 RIPPLY3P57055 190 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 ARFGEF3Q5TH69 2177 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 CD5LO43866 347 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 TCTAP57738 103 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 RHOGP84095 191 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 HIST1H1AQ02539 215 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-204ENST00000508930 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-204ENST00000508930 GPR82Q96P67 336 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 EPDR1Q9UM22 224 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 ZNF257Q9Y2Q1 563 aa11.65□□□□□ -0.54
TRIM41-204ENST00000508930 SAA1P0DJI8 122 aaPredicted RBP11.64□□□□□ -0.55
TRIM41-204ENST00000508930 Q5PR19 223 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 LINC00305Q7Z4B0 112 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 TPPP3Q9BW30 176 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 KBTBD11-OT1A0A1B0GTJ5 212 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 C7orf71A4D174 169 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 COL8A1P27658 744 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 Q6ZT83 130 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 ZC2HC1AQ96GY0 325 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 SUB1P53999 127 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRIM41-204ENST00000508930 PET117Q6UWS5 81 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 CACNG8Q8WXS5 425 aa11.64□□□□□ -0.55
TRIM41-204ENST00000508930 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.63□□□□□ -0.55
TRIM41-204ENST00000508930 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
TRIM41-204ENST00000508930 FA2HQ7L5A8 372 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 FRYLO94915 3013 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 PCNX2A6NKB5 2137 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 MOSP00540 346 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 REG1BP48304 166 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 GTF2H5Q6ZYL4 71 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 FNDC4Q9H6D8 234 aaPredicted RBP11.63□□□□□ -0.55
TRIM41-204ENST00000508930 TRAV8-6A0A0B4J262 113 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 SRRM4A7MD48 611 aaKnown RBP11.63□□□□□ -0.55
TRIM41-204ENST00000508930 SSBP2P81877 361 aaPredicted RBP11.63□□□□□ -0.55
TRIM41-204ENST00000508930 PRSS3P2Q8NHM4 247 aa11.63□□□□□ -0.55
TRIM41-204ENST00000508930 WDFY4Q6ZS81 3184 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 RNFT1Q5M7Z0 435 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 VWA1Q6PCB0 445 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 RBPMS2Q6ZRY4 209 aaKnown RBP11.62□□□□□ -0.55
TRIM41-204ENST00000508930 ITLN1Q8WWA0 313 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 FLYWCH2Q96CP2 140 aaKnown RBP11.62□□□□□ -0.55
TRIM41-204ENST00000508930 PERPQ96FX8 193 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 URB1-AS1Q96HZ7 61 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 TMUB1Q9BVT8 246 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 RPS20P60866 119 aaKnown RBP11.62□□□□□ -0.55
TRIM41-204ENST00000508930 TMEM178AQ8NBL3 297 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 FER1L6-AS2Q96M78 137 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 ZNF714Q96N38 554 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 MS4A6AQ9H2W1 248 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 FRYQ5TBA9 3013 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
TRIM41-204ENST00000508930 VWC2LB2RUY7 222 aa11.61□□□□□ -0.55
TRIM41-204ENST00000508930 NBEAP1P0C6P0 100 aa11.61□□□□□ -0.55
TRIM41-204ENST00000508930 NHLH1Q02575 133 aa11.61□□□□□ -0.55
TRIM41-204ENST00000508930 C17orf58Q2M2W7 97 aa11.61□□□□□ -0.55
TRIM41-204ENST00000508930 NAA38Q9BRA0 125 aaKnown RBP11.61□□□□□ -0.55
TRIM41-204ENST00000508930 PRRC2CQ9Y520 2896 aaKnown RBP11.61□□□□□ -0.55
TRIM41-204ENST00000508930 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
TRIM41-204ENST00000508930 OR8A1Q8NGG7 326 aa11.61□□□□□ -0.55
TRIM41-204ENST00000508930 CCL13Q99616 98 aa11.61□□□□□ -0.55
TRIM41-204ENST00000508930 C10orf55Q5SWW7 151 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms