RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 SMIM20Q8N5G0 67 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 OR4E2Q8NGC2 313 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 OR4D11Q8NGI4 311 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 OR5A1Q8NGJ0 315 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 OR8D4Q8NGM9 314 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 OR13C6PQ8NH95 151 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 FAM172AQ8WUF8 416 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 ZNF625Q96I27 306 aaPredicted RBP0.73□□□□□ -2.29
SMN2-208ENST00000508258 GINS4Q9BRT9 223 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 YIPF3Q9GZM5 350 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 IMUPQ9GZP8 106 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 LYRM2Q9NU23 88 aaPredicted RBP0.73□□□□□ -2.29
SMN2-208ENST00000508258 MED29Q9NX70 200 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 SS18L2Q9UHA2 77 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 EPDR1Q9UM22 224 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 UTP11Q9Y3A2 253 aaKnown RBP0.73□□□□□ -2.29
SMN2-208ENST00000508258 PTPRBP23467 1997 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 MYO9BQ13459 2157 aa0.73□□□□□ -2.29
SMN2-208ENST00000508258 RGS12O14924 1447 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 UNC13AQ9UPW8 1703 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 SCN10AQ9Y5Y9 1956 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 DENND4CQ5VZ89 1909 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 PLXND1Q9Y4D7 1925 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 RIMBP3CA6NJZ7 1639 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 RIMBP3BA6NNM3 1639 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 RIMBP3Q9UFD9 1639 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 SBF1O95248 1867 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 CCDC88AQ3V6T2 1871 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 GBF1Q92538 1859 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 C7orf71A4D174 169 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 F8W036 122 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 G3V2T6 193 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 M0R378 163 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 OVOL1O14753 267 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 TAX1BP3O14907 124 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 OR2T1O43869 369 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 FABP1P07148 127 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 ZNF705BP0CI00 300 aaPredicted RBP0.72□□□□□ -2.29
SMN2-208ENST00000508258 MIFP14174 115 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 PHBP35232 272 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 KRTAP12-4P60329 112 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 GNG5P63218 68 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 ZNF846Q147U1 533 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 ELOBQ15370 118 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 TSNQ15631 228 aaKnown RBP0.72□□□□□ -2.29
SMN2-208ENST00000508258 AKR1C8PQ5T2L2 129 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 DPPA3Q6W0C5 159 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 GRINAQ7Z429 371 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 C3orf56Q8N813 242 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 WFDC11Q8NEX6 87 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 OR13D1Q8NGV5 346 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 STAG3L4Q8TBR4 150 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 AQP3Q92482 292 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 LYSMD1Q96S90 227 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 HIST1H2BLQ99880 126 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 PBOV1Q9GZY1 135 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 TMEM126AQ9H061 195 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 CST9LQ9H4G1 147 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 TRABDQ9H4I3 376 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 BIN3Q9NQY0 253 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 ACER3Q9NUN7 267 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 SMPXQ9UHP9 88 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 UFC1Q9Y3C8 167 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 DOCK3Q8IZD9 2030 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 UHRF1BP1Q6BDS2 1440 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 SETD5Q9C0A6 1442 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 PBRM1Q86U86 1689 aa0.72□□□□□ -2.29
SMN2-208ENST00000508258 BAHCC1Q9P281 2608 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 COL11A1P12107 1806 aaPredicted RBP0.71□□□□□ -2.3
SMN2-208ENST00000508258 UBR2Q8IWV8 1755 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 PPP5D1E7EU14 171 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 H7C1C5 153 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 J3QKU1 62 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 AIPO00170 330 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 NDUFC2O95298 119 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 CSN2P05814 226 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 SERPINB1P30740 379 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 SRP14P37108 136 aaKnown RBP0.71□□□□□ -2.3
SMN2-208ENST00000508258 AKR1C3P42330 323 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 TCTAP57738 103 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 LCN6P62502 163 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 EIF5AP63241 154 aaKnown RBP0.71□□□□□ -2.3
SMN2-208ENST00000508258 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 SPANXN5Q5MJ07 72 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 TRIQKQ629K1 86 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 C3orf33Q6P1S2 294 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 C22orf39Q6P5X5 142 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 FP248Q71RG6 208 aaPredicted RBP0.71□□□□□ -2.3
SMN2-208ENST00000508258 CANT1Q8WVQ1 401 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 Q96M85 177 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 SERPINI1Q99574 410 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 SLC50A1Q9BRV3 221 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 PCBD2Q9H0N5 130 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 CENPHQ9H3R5 247 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 NHP2Q9NX24 153 aaKnown RBP0.71□□□□□ -2.3
SMN2-208ENST00000508258 TAS2R4Q9NYW5 299 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 SSR3Q9UNL2 185 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 CACNA1GO43497 2377 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 COL4A1P02462 1669 aa0.71□□□□□ -2.3
SMN2-208ENST00000508258 YTHDC2Q9H6S0 1430 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms