RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 Q6Q795 121 aa1.15□□□□□ -2.23
HMGB1P28-201ENST00000507778 LCA10Q71F78 164 aa1.15□□□□□ -2.23
HMGB1P28-201ENST00000507778 SLC25A40Q8TBP6 338 aa1.15□□□□□ -2.23
HMGB1P28-201ENST00000507778 NMNAT1Q9HAN9 279 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P28-201ENST00000507778 SLC35A3Q9Y2D2 325 aa1.15□□□□□ -2.23
HMGB1P28-201ENST00000507778 STRCQ7RTU9 1775 aa1.15□□□□□ -2.23
HMGB1P28-201ENST00000507778 BRWD1Q9NSI6 2320 aa1.15□□□□□ -2.23
HMGB1P28-201ENST00000507778 RALGAPA2Q2PPJ7 1873 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 MAST2Q6P0Q8 1798 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 C7orf71A4D174 169 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 OR7C1O76099 320 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 PROSCO94903 275 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 DEFA3P59666 94 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 RHOGP84095 191 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 LIN52Q52LA3 116 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 GNPDA2Q8TDQ7 276 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 HIST1H2BLQ99880 126 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 RNF122Q9H9V4 155 aa1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 BAZ2BQ9UIF8 2168 aaKnown RBP1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 HELZ2Q9BYK8 2649 aaKnown RBP1.14□□□□□ -2.23
HMGB1P28-201ENST00000507778 A0A087WX48 190 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 TMEM210A6NLX4 147 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 CYB5BO43169 146 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 SULT1B1O43704 296 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 HYPMO75409 117 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 IFNA6P05013 189 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 RAB4BP61018 213 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 RHOBP62745 196 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 TSNQ15631 228 aaKnown RBP1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 OR8D4Q8NGM9 314 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 WFDC5Q8TCV5 224 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 FAM172AQ8WUF8 416 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 ODF3Q96PU9 254 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 KLK9Q9UKQ9 250 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 HS3ST2Q9Y278 367 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 ARL2BPQ9Y2Y0 163 aa1.13□□□□□ -2.23
HMGB1P28-201ENST00000507778 PCDH15Q96QU1 1955 aa1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 LAMB2P55268 1798 aa1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 ERP29P30040 261 aaKnown RBP1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 ANP32AP39687 249 aaKnown RBP1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 BRMS1LQ5PSV4 323 aa1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 LYRM7Q5U5X0 104 aa1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 OR10J5Q8NHC4 309 aa1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 SFT2D1Q8WV19 159 aa1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 ITFG2Q969R8 447 aa1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 ADAT3Q96EY9 351 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 MED1Q15648 1581 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P28-201ENST00000507778 TRAV3A0A0B4J244 114 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 TRAV12-1A0A0B4J245 112 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 IGKV1-9A0A0C4DH69 117 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 LYZL6O75951 148 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 OR2T10Q8NGZ9 312 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 CHMP6Q96FZ7 201 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 MRPL57Q9BQC6 102 aaKnown RBP1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 ENY2Q9NPA8 101 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 FAM32AQ9Y421 112 aaKnown RBP1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
HMGB1P28-201ENST00000507778 FAM159BA6NKW6 160 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 CLDN25C9JDP6 229 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 SERPINA1P01009 418 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 CST2P09228 141 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 SRIP30626 198 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 ZNF93P35789 620 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 SERPINB9P50453 376 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 PIGPP57054 158 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 ESRGQ1W209 222 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 LINC00301Q8NCQ3 95 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 OR11H6Q8NGC7 330 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 DGCR14Q96DF8 476 aaKnown RBP1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 TMEM133Q9H2Q1 129 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 PARVBQ9HBI1 364 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 UTP11Q9Y3A2 253 aaKnown RBP1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 HEATR5BQ9P2D3 2071 aa1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 INTS1Q8N201 2190 aaKnown RBP1.1□□□□□ -2.23
HMGB1P28-201ENST00000507778 LOC110117498A0A087WWA1 95 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 TRBV6-7A0A0A0MS04 114 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 TRAV4A0A0B4J268 109 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 HSD11B1P28845 292 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 SRP14P37108 136 aaKnown RBP1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 EIF5AP63241 154 aaKnown RBP1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 MRPS25P82663 173 aaKnown RBP1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 DEFB115Q30KQ5 88 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 TEX47Q8TBZ9 253 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 ZNF418Q8TF45 676 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 C6orf62Q9GZU0 229 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 BCL2L10Q9HD36 194 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 RASL12Q9NYN1 266 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 OPTCQ9UBM4 332 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 C22orf24Q9Y442 160 aa1.09□□□□□ -2.23
HMGB1P28-201ENST00000507778 KIF13BQ9NQT8 1826 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 FMN1Q68DA7 1419 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 MYOFQ9NZM1 2061 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 CCDC88AQ3V6T2 1871 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 COL4A5P29400 1685 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 TRBV19A0A075B6N1 114 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 TRBV6-8A0A0A6YYG3 113 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 CYBAP13498 195 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 RNASE4P34096 147 aaKnown RBP1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 CTAG1AP78358 180 aa1.08□□□□□ -2.24
HMGB1P28-201ENST00000507778 MRPS15P82914 257 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms