RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 Q6Q795 121 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 LCA10Q71F78 164 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 TRAPPC6BQ86SZ2 158 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 OR4E2Q8NGC2 313 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 OR11H6Q8NGC7 330 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 GNPDA2Q8TDQ7 276 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 MRPL32Q9BYC8 188 aaKnown RBP1.12□□□□□ -2.23
CHD1-203ENST00000505657 ARMC1Q9NVT9 282 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 TVP23BQ9NYZ1 205 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 ARL5AQ9Y689 179 aa1.12□□□□□ -2.23
CHD1-203ENST00000505657 DIDO1Q9BTC0 2240 aaKnown RBP1.12□□□□□ -2.23
CHD1-203ENST00000505657 MED1Q15648 1581 aaPredicted RBP1.12□□□□□ -2.23
CHD1-203ENST00000505657 TNRC6AQ8NDV7 1962 aaKnown RBP1.12□□□□□ -2.23
CHD1-203ENST00000505657 COL4A5P29400 1685 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 NUP98P52948 1817 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 MEIKINA0A087WXM9 373 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 A0A087X0T9 212 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 TRAV1-1A0A0B4J248 108 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 A0A0D9SG52 128 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 TRAPPC13A5PLN9 417 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 OR5F1O95221 314 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 CTSDP07339 412 aaPredicted RBP1.11□□□□□ -2.23
CHD1-203ENST00000505657 ATP5G3P48201 142 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 ARF6P62330 175 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 RHOBP62745 196 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 ZNF846Q147U1 533 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 RHEBQ15382 184 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 Q6ZQT0 140 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 GOLT1AQ6ZVE7 132 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 OR8D4Q8NGM9 314 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 C2orf50Q96LR7 162 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 SLC50A1Q9BRV3 221 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 YIPF3Q9GZM5 350 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 RIC1Q4ADV7 1423 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 MIA2Q96PC5 1412 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 ARHGEF28Q8N1W1 1705 aaKnown RBP1.11□□□□□ -2.23
CHD1-203ENST00000505657 PLXNA4Q9HCM2 1894 aa1.11□□□□□ -2.23
CHD1-203ENST00000505657 TRAV3A0A0B4J244 114 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 TRAV4A0A0B4J268 109 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 IGKV1-9A0A0C4DH69 117 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 OR2B3O76000 313 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 RPSAP08865 295 aaKnown RBP1.1□□□□□ -2.23
CHD1-203ENST00000505657 PIGPP57054 158 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 YPEL3P61236 119 aaPredicted RBP1.1□□□□□ -2.23
CHD1-203ENST00000505657 LYRM7Q5U5X0 104 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 DHRS4L2Q6PKH6 230 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 LINC00471Q8N535 108 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 C15orf53Q8NAA6 179 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 AQP3Q92482 292 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 GPR146Q96CH1 333 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 MED29Q9NX70 200 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 STOML2Q9UJZ1 356 aa1.1□□□□□ -2.23
CHD1-203ENST00000505657 UTP11Q9Y3A2 253 aaKnown RBP1.1□□□□□ -2.23
CHD1-203ENST00000505657 TNRC6BQ9UPQ9 1833 aaKnown RBP1.1□□□□□ -2.23
CHD1-203ENST00000505657 CHD3Q12873 2000 aaKnown RBP1.1□□□□□ -2.23
CHD1-203ENST00000505657 J3QRK9 145 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 CST8O60676 142 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 ATG12O94817 140 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 TCL1BO95988 128 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 OR4E1P0C645 316 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 ASAH2BP0C7U1 165 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 MGST1P10620 155 aaKnown RBP1.09□□□□□ -2.23
CHD1-203ENST00000505657 NEFHP12036 1026 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 G0S2P27469 103 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 HSPE1P61604 102 aaKnown RBP1.09□□□□□ -2.23
CHD1-203ENST00000505657 RNASE10Q5GAN6 216 aaKnown RBP1.09□□□□□ -2.23
CHD1-203ENST00000505657 Q6ZSA8 131 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 ZNF826PQ6ZT77 177 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 DEFB128Q7Z7B8 93 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 OR4D11Q8NGI4 311 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 STAG3L4Q8TBR4 150 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 FAM172AQ8WUF8 416 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 AP3S1Q92572 193 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 ADAT3Q96EY9 351 aaPredicted RBP1.09□□□□□ -2.23
CHD1-203ENST00000505657 HIST1H2BLQ99880 126 aa1.09□□□□□ -2.23
CHD1-203ENST00000505657 PAIP2Q9BPZ3 127 aaKnown RBP1.09□□□□□ -2.23
CHD1-203ENST00000505657 NAA38Q9BRA0 125 aaKnown RBP1.09□□□□□ -2.23
CHD1-203ENST00000505657 CASP8AP2Q9UKL3 1982 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 RIMBP3CA6NJZ7 1639 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 RIMBP3BA6NNM3 1639 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 RIMBP3Q9UFD9 1639 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 RP1L1Q8IWN7 2480 aaPredicted RBP1.08□□□□□ -2.24
CHD1-203ENST00000505657 KMT2BQ9UMN6 2715 aaPredicted RBP1.08□□□□□ -2.24
CHD1-203ENST00000505657 TRAV14DV4A0A0A6YYC5 116 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 SULT1B1O43704 296 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 BANF1O75531 89 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 COX6A1P12074 109 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 NCALDP61601 193 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 RPL19P84098 196 aaKnown RBP1.08□□□□□ -2.24
CHD1-203ENST00000505657 CDK5R1Q15078 307 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 SURF2Q15527 256 aaPredicted RBP1.08□□□□□ -2.24
CHD1-203ENST00000505657 RPS19BP1Q86WX3 136 aaKnown RBP1.08□□□□□ -2.24
CHD1-203ENST00000505657 SERPINI1Q99574 410 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 ADAT1Q9BUB4 502 aaKnown RBP1.08□□□□□ -2.24
CHD1-203ENST00000505657 PARVBQ9HBI1 364 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 SS18L2Q9UHA2 77 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 LAMB2P55268 1798 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 POLEQ07864 2286 aa1.08□□□□□ -2.24
CHD1-203ENST00000505657 MYLKQ15746 1914 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms