RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 A6NNC1 897 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 A8MWL6 223 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 CNTFRP26992 372 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 TDGF1P3P51864 188 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 DLX6P56179 175 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 C22orf34Q6ZV56 151 aa11.48□□□□□ -0.57
TCOF1-207ENST00000504761 LRP4O75096 1905 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 GPX4P36969 197 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-207ENST00000504761 SEPSECSQ9HD40 501 aaKnown RBP11.47□□□□□ -0.57
TCOF1-207ENST00000504761 YAE1D1Q9NRH1 226 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 TMEM167AQ8TBQ9 72 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 IGFBPL1Q8WX77 278 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 SIGLEC9Q9Y336 463 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 TRANK1O15050 2925 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 CX3CL1P78423 397 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 A0A1W2PS18 150 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 H3BUX3 64 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 SAA4P35542 130 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
TCOF1-207ENST00000504761 HIST1H2BAQ96A08 127 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 PGLYRP4Q96LB8 373 aa11.47□□□□□ -0.57
TCOF1-207ENST00000504761 XIRP2A4UGR9 3374 aa11.46□□□□□ -0.57
TCOF1-207ENST00000504761 TMEM8BA6NDV4 472 aa11.46□□□□□ -0.57
TCOF1-207ENST00000504761 FAM90A9PA6NNJ1 464 aa11.46□□□□□ -0.57
TCOF1-207ENST00000504761 PRTN3P24158 256 aa11.46□□□□□ -0.57
TCOF1-207ENST00000504761 GNG5P63218 68 aa11.46□□□□□ -0.57
TCOF1-207ENST00000504761 CTSZQ9UBR2 303 aa11.46□□□□□ -0.57
TCOF1-207ENST00000504761 CARHSP1Q9Y2V2 147 aaKnown RBP11.46□□□□□ -0.57
TCOF1-207ENST00000504761 MARVELD3Q96A59 401 aa11.46□□□□□ -0.57
TCOF1-207ENST00000504761 SFRP2Q96HF1 295 aa11.46□□□□□ -0.58
TCOF1-207ENST00000504761 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.58
TCOF1-207ENST00000504761 HIVEP2P31629 2446 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 TCRBV4S1A1TA0A5B7 111 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 RIGQ13278 110 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 RBPMS2Q6ZRY4 209 aaKnown RBP11.45□□□□□ -0.58
TCOF1-207ENST00000504761 Q6ZSR3 168 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 MGST2Q99735 147 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 MUC21A0A0G2JKD1 596 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 MUC21A0A140T8X8 626 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 SEC14L6B5MCN3 397 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 ADORA2A-AS1P86434 159 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 RELQ04864 619 aaPredicted RBP11.45□□□□□ -0.58
TCOF1-207ENST00000504761 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 MUC21Q5SSG8 566 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 TEX36Q5VZQ5 186 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 PRO1933Q9H354 126 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 MAS1LP35410 378 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 PAX9P55771 341 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 SPANXN1Q5VSR9 72 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 RNF125Q96EQ8 232 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 B4DSR2 109 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 APCSP02743 223 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 C11orf42Q8N5U0 333 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 OR10J6PQ8NGY7 276 aa11.45□□□□□ -0.58
TCOF1-207ENST00000504761 TNRC6AQ8NDV7 1962 aaKnown RBP11.44□□□□□ -0.58
TCOF1-207ENST00000504761 SIAH2O43255 324 aa11.44□□□□□ -0.58
TCOF1-207ENST00000504761 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
TCOF1-207ENST00000504761 EIF4E3Q8N5X7 224 aaKnown RBP11.44□□□□□ -0.58
TCOF1-207ENST00000504761 NPFFO15130 113 aa11.44□□□□□ -0.58
TCOF1-207ENST00000504761 ID1P41134 155 aa11.44□□□□□ -0.58
TCOF1-207ENST00000504761 A0A1W2PRX2 142 aa11.44□□□□□ -0.58
TCOF1-207ENST00000504761 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
TCOF1-207ENST00000504761 OR1P1Q8NH06 330 aa11.44□□□□□ -0.58
TCOF1-207ENST00000504761 M0R1W7 72 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 FAM162BQ5T6X4 162 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 C19orf35Q6ZS72 473 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 PEX7O00628 323 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 ISLRO14498 428 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 PSG1P11464 419 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 LYL1P12980 280 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 C15orf32Q32M92 178 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 PACRGQ96M98 296 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-207ENST00000504761 LOC389332A0A1B0GUA5 103 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 A0A1W2PPI3 338 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 C22orf46C9J442 243 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 PLXNB1O43157 2135 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 MGPP08493 103 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 ZNF329Q86UD4 541 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 IGHV3OR16-12A0A075B7B8 117 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 CBLN1P23435 193 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 NEU1Q99519 415 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 SDF2L1Q9HCN8 221 aa11.43□□□□□ -0.58
TCOF1-207ENST00000504761 HLA-DRB1P01911 266 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 HIST1H1AQ02539 215 aaPredicted RBP11.42□□□□□ -0.58
TCOF1-207ENST00000504761 TWIST1Q15672 202 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 Q9H3A6 140 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 JMJD1CQ15652 2540 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 NAV3Q8IVL0 2385 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 GRIFINA4D1Z8 144 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 M0R2Z0 102 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 RPL23P62829 140 aaKnown RBP11.42□□□□□ -0.58
TCOF1-207ENST00000504761 MBD3L1Q8WWY6 194 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 SRRM4A7MD48 611 aaKnown RBP11.42□□□□□ -0.58
TCOF1-207ENST00000504761 GGCTO75223 188 aaKnown RBP11.42□□□□□ -0.58
TCOF1-207ENST00000504761 VENTXO95231 258 aa11.42□□□□□ -0.58
TCOF1-207ENST00000504761 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms