RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 G3V318 75 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 NUPL2O15504 423 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 OR2J3O76001 311 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 IFNA1P01562 189 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 LINC00869P0C866 280 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 IGLC1P0CG04 106 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 S100A1P23297 94 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 PPIFP30405 207 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 TAS2R45P59539 299 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 PLP1P60201 277 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 YPEL3P61236 119 aaPredicted RBP6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 BLCAPP62952 87 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 RHOGP84095 191 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 ATP5G2Q06055 141 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 PMS2P11Q13670 270 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 Q56UQ5 140 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 SPSB3Q6PJ21 355 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 Q8N2B8 174 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 SFT2D1Q8WV19 159 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 RCC1LQ96I51 464 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 MRPL32Q9BYC8 188 aaKnown RBP6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 HECTD1Q9ULT8 2610 aa6.37□□□□□ -1.39
TOPBP1-202ENST00000503338 NOTCH2Q04721 2471 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 IGKV1D-37A0A075B6S9 117 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 MAP1LC3B2A6NCE7 125 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 SH2D7A6NKC9 451 aaPredicted RBP6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 LINC01548A6NM66 108 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 COX7A2P2O60397 106 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 YIF1AO95070 293 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 NDUFB8O95169 186 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 LY6G6DO95868 133 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 TOMM40O96008 361 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 CRYBA1P05813 215 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 ELANEP08246 267 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 OR5G3P0C626 314 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 RD3LP0DJH9 198 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 PSMB3P49720 205 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 FHITP49789 147 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 PEA15Q15121 130 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 C15orf32Q32M92 178 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 FAM122CQ6P4D5 195 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 C19orf35Q6ZS72 473 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 IL17RELQ6ZVW7 336 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 RPP25LQ8N5L8 163 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 ZNF502Q8TBZ5 544 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 Q8WTZ3 238 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 PCNPQ8WW12 178 aaKnown RBP6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 MAP1LC3BQ9GZQ8 125 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 VSIRQ9H7M9 311 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 DNAJC4Q9NNZ3 241 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 CSMD2Q7Z408 3487 aa6.36□□□□□ -1.39
TOPBP1-202ENST00000503338 PDZD2O15018 2839 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 IGHV3-21A0A0B4J1V1 117 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 MFSD2BA6NFX1 497 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 DNAJC9-AS1A6NH13 148 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 ATP6V1G1O75348 118 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 NDUFS6O75380 124 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 HYPMO75409 117 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 CXorf1O96002 111 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 IGHV3-48P01763 117 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 IGHG4P01861 327 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 TRGV3P03979 118 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 TPPP2P59282 170 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 CFHR3Q02985 330 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 RELQ04864 619 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 KHDC3LQ587J8 217 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 TEX38Q6PEX7 206 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 PQLC2Q6ZP29 291 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 SLC7A5P1Q8MH63 180 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 STXBP6Q8NFX7 210 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 OR51G1Q8NGK1 321 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 RAB24Q969Q5 203 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 FAM210AQ96ND0 272 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 TXNDC17Q9BRA2 123 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 SLC25A22Q9H936 323 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 ZNF702PQ9H963 129 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 MANBALQ9NQG1 85 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 TECRQ9NZ01 308 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 FUT9Q9Y231 359 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 RFNGQ9Y644 331 aa6.35□□□□□ -1.39
TOPBP1-202ENST00000503338 ASH1LQ9NR48 2969 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 MYO9AB2RTY4 2548 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 HIVEP2P31629 2446 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 ANKRD34BA5PLL1 514 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 KRBOX1C9JBD0 128 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 OR2C1O95371 312 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 IGKV1-17P01599 117 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 STAG3L2P0CL84 134 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 STAG3L3P0CL85 134 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 C8orf88P0DMB2 117 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 PF4V1P10720 104 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 PSG1P11464 419 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 RAB9AP51151 201 aa6.34□□□□□ -1.39
TOPBP1-202ENST00000503338 HILS1P60008 231 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms