RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 RAB4BP61018 213 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 CNBPP62633 177 aaKnown RBP0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 SRSF6Q13247 344 aaKnown RBP0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 HIST3H2BBQ8N257 126 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR4E2Q8NGC2 313 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 SLC25A40Q8TBP6 338 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 ITFG2Q969R8 447 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 SLC39A9Q9NUM3 307 aa0.6□□□□□ -2.31
CDC42SE2-204ENST00000502639 PIK3C2GO75747 1445 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 RIC1Q4ADV7 1423 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 PIRO00625 290 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR1I1O60431 355 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 HAND1O96004 215 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 CTXN2P0C2S0 81 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 RHEBQ15382 184 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 RGS21Q2M5E4 152 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 IAH1Q2TAA2 248 aaPredicted RBP0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 DPPA3Q6W0C5 159 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 LINC00471Q8N535 108 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR52L1Q8NGH7 329 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR51A2Q8NGJ7 313 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 OR13D1Q8NGV5 346 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 STAG3L4Q8TBR4 150 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 CT55Q8WUE5 264 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 C20orf27Q9GZN8 174 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 OSTCQ9NRP0 149 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 GLTPQ9NZD2 209 aa0.59□□□□□ -2.31
CDC42SE2-204ENST00000502639 MCM3APO60318 1980 aa0.59□□□□□ -2.32
CDC42SE2-204ENST00000502639 SCN3AQ9NY46 2000 aa0.59□□□□□ -2.32
CDC42SE2-204ENST00000502639 SMIM23A6NLE4 172 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 PDE6DO43924 150 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 LYZL6O75951 148 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 IFNA10P01566 189 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 CEBPGP53567 150 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 AP3S2P59780 193 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 CCL7P80098 99 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 EDDM3AQ14507 147 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 LCA10Q71F78 164 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 OR6V1Q8N148 313 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 C3orf56Q8N813 242 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 GDPD1Q8N9F7 314 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 ZNF418Q8TF45 676 aaPredicted RBP0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 SIGMAR1Q99720 223 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 MRPL57Q9BQC6 102 aaKnown RBP0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 CCDC90BQ9GZT6 254 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 FBXO5Q9UKT4 447 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 SLC22A13Q9Y226 551 aa0.58□□□□□ -2.32
CDC42SE2-204ENST00000502639 ADGRB2O60241 1585 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 SCN8AQ9UQD0 1980 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 A0A0D9SG52 128 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 SERPINE1P05121 402 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 RBP1P09455 135 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 OR4E1P0C645 316 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 COX6A1P12074 109 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 CYBAP13498 195 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 TMEM97Q5BJF2 176 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 OOSP2Q86WS3 158 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 Q8IYB0 196 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 KRT222Q8N1A0 295 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 MNS1Q8NEH6 495 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 OR8D4Q8NGM9 314 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 BORCS7Q96B45 105 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 GPR146Q96CH1 333 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 CMSS1Q9BQ75 279 aaKnown RBP0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 TLNRD1Q9H1K6 362 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 KLK9Q9UKQ9 250 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 EPDR1Q9UM22 224 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 UTP11Q9Y3A2 253 aaKnown RBP0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 MYH7BA7E2Y1 1941 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 EML5Q05BV3 1969 aa0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 PCF11O94913 1555 aaKnown RBP0.57□□□□□ -2.32
CDC42SE2-204ENST00000502639 TRBV6-8A0A0A6YYG3 113 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 FAM159BA6NKW6 160 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 B4DSR2 109 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 HYPMO75409 117 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 UBL3O95164 117 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 IFNA6P05013 189 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 C8GP07360 202 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 CASP1P29466 404 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 RNASE4P34096 147 aaKnown RBP0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 SPANXN5Q5MJ07 72 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 BRMS1LQ5PSV4 323 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 Q6Q795 121 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 PHF13Q86YI8 300 aaPredicted RBP0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 LINC00526Q96FQ7 95 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 TRIM4Q9C037 500 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 TMEM133Q9H2Q1 129 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 TAS2R4Q9NYW5 299 aa0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 MED1Q15648 1581 aaPredicted RBP0.56□□□□□ -2.32
CDC42SE2-204ENST00000502639 SYNE2Q8WXH0 6885 aaKnown RBP0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 TRAV12-1A0A0B4J245 112 aa0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 TCL1BO95988 128 aa0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 S100A6P06703 90 aa0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 S100A4P26447 101 aaKnown RBP0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 ATP5G3P48201 142 aa0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 HIST1H3AP68431 136 aa0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 H3F3AP84243 136 aa0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 FADDQ13158 208 aa0.55□□□□□ -2.32
CDC42SE2-204ENST00000502639 CLECL1Q8IZS7 167 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms