RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	PSMB11	A5LHX3	300 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	AGPAT2	O15120	278 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	CLN5	O75503	358 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	ELANE	P08246	267 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	IGLC1	P0CG04	106 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	FOXE3	Q13461	319 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	C15orf32	Q32M92	178 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	SHISA2	Q6UWI4	295 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	ZNF329	Q86UD4	541 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	SCGB1C1	Q8TD33	95 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	TMED6	Q8WW62	240 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	CCDC140	Q96MF4	163 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	MS4A10	Q96PG2	267 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	TRGV9	Q99603	122 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	TXN2	Q99757	166 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	SLC25A32	Q9H2D1	315 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	C21orf62	Q9NYP8	219 aa		9.43	□□□□□ -0.9
MATR3-231	ENST00000502394	IGKV1-17	P01599	117 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	TRGV3	P03979	118 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	CRYBA1	P05813	215 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	LINC00869	P0C866	280 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	OR10J1	P30954	320 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	RPL29	P47914	159 aa	Known RBP	9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	CAMLG	P49069	296 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	RAB9A	P51151	201 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	MFAP4	P55083	255 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	ACSM6	Q6P461	480 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	ALKAL2	Q6UX46	152 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	ZNF767P	Q75MW2	155 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	LINC01006	Q8NI28	216 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	USMG5	Q96IX5	58 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	CXorf58	Q96LI9	332 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	ZNF355P	Q9NSJ1	428 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394		S4R3C0	116 aa		9.42	□□□□□ -0.9
MATR3-231	ENST00000502394	TRBV7-1	A0A0A6YYK4	115 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	TCRBV4S1A1T	A0A5B7	111 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	IFNA7	P01567	189 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	PF4V1	P10720	104 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	NPBWR1	P48145	328 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	SULT1A2	P50226	295 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	TPPP2	P59282	170 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	SLC35B1	P78383	322 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	SERF2	P84101	59 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	ATP5G2	Q06055	141 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	EIF5AL1	Q6IS14	154 aa	Known RBP	9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	TEX38	Q6PEX7	206 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	TMEM182	Q6ZP80	229 aa	Predicted RBP	9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	LCNL1	Q6ZST4	164 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	CYP2G1P	Q6ZSU1	146 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	COMMD1	Q8N668	190 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	C2CD3	Q4AC94	2353 aa		9.41	□□□□□ -0.9
MATR3-231	ENST00000502394	TRAV30	A0A087WSZ9	112 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	C17orf112	F2Z3M2	114 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	YIF1A	O95070	293 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	IGHV3-23	P01764	117 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	ADM	P35318	185 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	ZNF90	Q03938	601 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	TCTEX1D4	Q5JR98	221 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	FAM74A1	Q5RGS3	127 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	MIC13	Q5XKP0	118 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	ZNF343	Q6P1L6	599 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	KLHDC1	Q8N7A1	406 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	STPG3	Q8N7X2	389 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	ZNF491	Q8N8L2	437 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	EEF1AKMT3	Q96AZ1	226 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	UBQLN2	Q9UHD9	624 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	PXMP4	Q9Y6I8	212 aa		9.4	□□□□□ -0.9
MATR3-231	ENST00000502394	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	9.39	□□□□□ -0.91
MATR3-231	ENST00000502394		A0A0G2JLM5	398 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	ZFP92	A6NM28	416 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	RPLP1	P05386	114 aa	Known RBP	9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	CTSG	P08311	255 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	PROK1	P58294	105 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	YPEL3	P61236	119 aa	Predicted RBP	9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	SELENOT	P62341	195 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	SRSF2	Q01130	221 aa	Known RBP	9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	RAB31	Q13636	194 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	TIGIT	Q495A1	244 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	ZNF709	Q8N972	641 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	BPIFC	Q8NFQ6	507 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	CHRDL1	Q9BU40	450 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	SSBP4	Q9BWG4	385 aa	Predicted RBP	9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	VSIR	Q9H7M9	311 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	KCNIP2	Q9NS61	270 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	SLC39A9	Q9NUM3	307 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	TEP1	Q99973	2627 aa	Known RBP	9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	NF1	P21359	2839 aa		9.39	□□□□□ -0.91
MATR3-231	ENST00000502394	UMAD1	C9J7I0	102 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	TGOLN2	O43493	480 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	GNG7	O60262	68 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	TSPAN15	O95858	294 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	TOMM40	O96008	361 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	GHRH	P01286	108 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	GATA2	P23769	480 aa	Predicted RBP	9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	GPR183	P32249	361 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	RAB5C	P51148	216 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	PLP1	P60201	277 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	B2M	P61769	119 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394		Q56UQ5	140 aa		9.38	□□□□□ -0.91
MATR3-231	ENST00000502394	FFAR4	Q5NUL3	377 aa		9.38	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms