RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ETV6P41212 452 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 CBX5P45973 191 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 HOXA1P49639 335 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-209ENST00000498725 TBCEQ15813 527 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-209ENST00000498725 KCTD21Q4G0X4 260 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 C15orf53Q8NAA6 179 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 OR5H2Q8NGV7 314 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 ZNRF2Q8NHG8 242 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 NRN1Q9NPD7 142 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 DIABLOQ9NR28 239 aa6.42□□□□□ -1.38
CCDC171-209ENST00000498725 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 F5H768 121 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 SCGB2A1O75556 95 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 IGKV1-17P01599 117 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 PRM2P04554 102 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 DEFB130AP0DP74 79 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 S100GP29377 79 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 SDC2P34741 201 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 AP2S1P53680 142 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-209ENST00000498725 SUB1P53999 127 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC171-209ENST00000498725 FAM3BP58499 235 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-209ENST00000498725 DHODHQ02127 395 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 RRN3P1Q2M238 152 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 DHRS11Q6UWP2 260 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 SIGLEC15Q6ZMC9 328 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 CADM3Q8N126 398 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 OR6F1Q8NGZ6 308 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 Q8WTZ3 238 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 MAGT1Q9H0U3 335 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 GOLT1BQ9Y3E0 138 aa6.41□□□□□ -1.38
CCDC171-209ENST00000498725 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
CCDC171-209ENST00000498725 F6UB75 175 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 M0QYG6 137 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 CORTO00230 105 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 IL4P05112 153 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 PSMB9P28065 219 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 HLA-DMAP28067 261 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 RND2P52198 227 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 TSPAN5P62079 268 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 OXA1LQ15070 435 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 USF2Q15853 346 aaPredicted RBP6.4□□□□□ -1.38
CCDC171-209ENST00000498725 C1orf158Q8N1D5 194 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 ZNF709Q8N972 641 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 OR4X1Q8NH49 305 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 TMEM208Q9BTX3 173 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 PDCD10Q9BUL8 212 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 SSR3Q9UNL2 185 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 LINC00588Q9Y4M8 146 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 U3KQE9 123 aa6.4□□□□□ -1.38
CCDC171-209ENST00000498725 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 ZNF705GA8MUZ8 300 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-209ENST00000498725 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 OR10J1P30954 320 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 HRH1P35367 487 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 NKX2-1P43699 371 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-209ENST00000498725 RORCP51449 518 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 AKR1C2P52895 323 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 CCL18P55774 89 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 TAS2R46P59540 309 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 TAS2R20P59543 309 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 CLINT1Q14677 625 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 FCN2Q15485 313 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 FAM78BQ5VT40 261 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 COQ8AQ8NI60 647 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 CNBD2Q96M20 576 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 UHRF2Q96PU4 802 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 PBDC1Q9BVG4 233 aa6.39□□□□□ -1.39
CCDC171-209ENST00000498725 WDR12Q9GZL7 423 aaKnown RBP6.39□□□□□ -1.39
CCDC171-209ENST00000498725 SAV1Q9H4B6 383 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-209ENST00000498725 A0A0A6YYH2 397 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 A0A0B4J293 547 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 LOC100506127A0A0U1RQW1 187 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 A6NJ64 397 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 EBAG9O00559 213 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 IGLC1P0CG04 106 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 PGAM2P15259 253 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 PI3P19957 117 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 PSG9Q00887 426 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 Q5VSD8 79 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 SSX7Q7RTT5 188 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 OR51G1Q8NGK1 321 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 RNASE11Q8TAA1 199 aaKnown RBP6.38□□□□□ -1.39
CCDC171-209ENST00000498725 ACY3Q96HD9 319 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 KRTAP1-5Q9BYS1 174 aa6.38□□□□□ -1.39
CCDC171-209ENST00000498725 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
CCDC171-209ENST00000498725 BUB3O43684 328 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 ID1P41134 155 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 HSPA13P48723 471 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 LPCAT3Q6P1A2 487 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 EBLN2Q6P2I7 272 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 PRSS54Q6PEW0 395 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 FOXI2Q6ZQN5 318 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 LYSMD2Q8IV50 215 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 RNF141Q8WVD5 230 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 NRG4Q8WWG1 115 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 NPIPB3Q92617 1050 aa6.37□□□□□ -1.39
CCDC171-209ENST00000498725 Q9H8V8 135 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms