RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 EIF3IQ13347 325 aaKnown RBP2.05□□□□□ -2.08
VPS36-206ENST00000497149 HSD17B12Q53GQ0 312 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 LAIR2Q6ISS4 152 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 FAM19A3Q7Z5A8 133 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 EXOC3-AS1Q8N2X6 119 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 OR4S1Q8NGB4 309 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 OR4C16Q8NGL9 310 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 SFT2D1Q8WV19 159 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 TEX37Q96LM6 180 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 CCL13Q99616 98 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 TSSK6Q9BXA6 273 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 NKX6-2Q9C056 277 aaPredicted RBP2.05□□□□□ -2.08
VPS36-206ENST00000497149 MED28Q9H204 178 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 TCEAL2Q9H3H9 227 aaPredicted RBP2.05□□□□□ -2.08
VPS36-206ENST00000497149 Q9H521 79 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 FBXL12Q9NXK8 326 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 TAAR3PQ9P1P4 343 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 CKLFQ9UBR5 152 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 RPUSD1Q9UJJ7 312 aaKnown RBP2.05□□□□□ -2.08
VPS36-206ENST00000497149 ANAPC10Q9UM13 185 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 UHRF1BP1LA0JNW5 1464 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 CECR2Q9BXF3 1484 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 ZCCHC11Q5TAX3 1644 aaKnown RBP2.05□□□□□ -2.08
VPS36-206ENST00000497149 ITGB4P16144 1822 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 KIF13BQ9NQT8 1826 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 CACNA1SQ13698 1873 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 TRBV24-1A0A075B6N3 115 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 TRAV4A0A0B4J268 109 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 PNMA8CA0A1B0GUJ8 204 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 DISP2A7MBM2 1401 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 EIF4G3O43432 1585 aaKnown RBP2.04□□□□□ -2.08
VPS36-206ENST00000497149 IGLV3-27P01718 113 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 APODP05090 189 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 CTSGP08311 255 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 PAEPP09466 180 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 AKAIN1P0CW23 69 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 MYH7P12883 1935 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 MYH9P35579 1960 aaKnown RBP2.04□□□□□ -2.08
VPS36-206ENST00000497149 LPAR6P43657 344 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 FKBP1AP62942 108 aaKnown RBP2.04□□□□□ -2.08
VPS36-206ENST00000497149 FKBP1CQ5VVH2 108 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 FMN1Q68DA7 1419 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 EBLN2Q6P2I7 272 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 GTF2H5Q6ZYL4 71 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 XIRP1Q702N8 1843 aaKnown RBP2.04□□□□□ -2.08
VPS36-206ENST00000497149 FANCMQ8IYD8 2048 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 FER1L6-AS1Q8NA97 138 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 OR11G2Q8NGC1 345 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 OR10D4PQ8NGN7 298 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 RPS4Y2Q8TD47 263 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 KLK6Q92876 244 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 TMEM106AQ96A25 262 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 TOMM6Q96B49 74 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 B9D2Q9BPU9 175 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 SLC25A21Q9BQT8 299 aaPredicted RBP2.04□□□□□ -2.08
VPS36-206ENST00000497149 AICDAQ9GZX7 198 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 ZNF106Q9H2Y7 1883 aaKnown RBP2.04□□□□□ -2.08
VPS36-206ENST00000497149 SCN3BQ9NY72 215 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 BICRAQ9NZM4 1560 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 OR5AC2Q9NZP5 309 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 SCP2D1Q9UJQ7 156 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 TNFSF18Q9UNG2 199 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 CYSLTR1Q9Y271 337 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 PLXND1Q9Y4D7 1925 aa2.04□□□□□ -2.08
VPS36-206ENST00000497149 SOX21Q9Y651 276 aaPredicted RBP2.04□□□□□ -2.08
VPS36-206ENST00000497149 CDK5RAP2Q96SN8 1893 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 RB1CC1Q8TDY2 1594 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 MYO15BQ96JP2 1530 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 OVOS2A0A0G2JMS6 1433 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 ZNF609O15014 1411 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 BBIP1A8MTZ0 92 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 M0R381 172 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 NCR2O95944 276 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 HIST1H1BP16401 226 aaKnown RBP2.03□□□□□ -2.08
VPS36-206ENST00000497149 HIST1H1DP16402 221 aaKnown RBP2.03□□□□□ -2.08
VPS36-206ENST00000497149 NFYBP25208 207 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 OPRM1P35372 400 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 GNG4P50150 75 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 MSMO1Q15800 293 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 COL5A1-AS1Q5SY13 56 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 BCL2L15Q5TBC7 163 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 TMEM244Q5VVB8 128 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 SCIMPQ6UWF3 145 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 Q6ZS49 121 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 C1orf174Q8IYL3 243 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 YIPF7Q8N8F6 280 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 MRPL30Q8TCC3 161 aaKnown RBP2.03□□□□□ -2.08
VPS36-206ENST00000497149 PP6455Q8WZ26 134 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 BORCS8Q96FH0 119 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 WDR61Q9GZS3 305 aaKnown RBP2.03□□□□□ -2.08
VPS36-206ENST00000497149 TUBA4BQ9H853 241 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 RNF122Q9H9V4 155 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 CCDC167Q9P0B6 97 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 PCTPQ9UKL6 214 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 AMMECR1Q9Y4X0 333 aaPredicted RBP2.03□□□□□ -2.08
VPS36-206ENST00000497149 NCKAP5O14513 1909 aa2.03□□□□□ -2.08
VPS36-206ENST00000497149 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
VPS36-206ENST00000497149 ROBO3Q96MS0 1386 aa2.02□□□□□ -2.09
VPS36-206ENST00000497149 LOC102725191A0A1B0GVB3 256 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms