RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ZNF532Q9HCE3 1301 aa0.82□□□□□ -2.28
VPS26A-208ENST00000497022 RTL1A6NKG5 1358 aa0.82□□□□□ -2.28
VPS26A-208ENST00000497022 RTEL1-TNFRSF6BF6WH68 1400 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 XIRP1Q702N8 1843 aaKnown RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 A0A0D9SEW6 157 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 A0A1B0GVG6 124 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 OR51F1A6NGY5 319 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 H7BYZ3 331 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 GPR31O00270 319 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 OR2J2O76002 312 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 DHFRP00374 187 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SMIM17P0DL12 118 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 RPL7P18124 248 aaKnown RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 RPS3P23396 243 aaKnown RBP eCLIP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 ERP29P30040 261 aaKnown RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 EIF2B2P49770 351 aaKnown RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 HSPE1P61604 102 aaKnown RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SUPT4H1P63272 117 aaKnown RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 S100A12P80511 92 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 RELAQ04206 551 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SLC38A11Q08AI6 406 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SURF2Q15527 256 aaPredicted RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 TMEM78Q5T7P6 136 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 FAM27BQ5VT28 67 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 HRCT1Q6UXD1 115 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SMIM15Q7Z3B0 74 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 KTN1-AS1Q86SY8 53 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 BPIFA4PQ86YQ2 179 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.81□□□□□ -2.28
VPS26A-208ENST00000497022 OR52R1Q8NGF1 315 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 OR8J3Q8NGG0 315 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 TERB2Q8NHR7 220 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SLC25A40Q8TBP6 338 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 GNPDA2Q8TDQ7 276 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 DCANP1Q8TF63 244 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 C11orf40Q8WZ69 217 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 TMEM106AQ96A25 262 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SCGB3A1Q96QR1 104 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 BOLA2Q9H3K6 86 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SLC39A9Q9NUM3 307 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 ACER3Q9NUN7 267 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 TVP23BQ9NYZ1 205 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 FRMPD1Q5SYB0 1578 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 TECPR2O15040 1411 aa0.81□□□□□ -2.28
VPS26A-208ENST00000497022 SCAF11Q99590 1463 aaKnown RBP0.8□□□□□ -2.28
VPS26A-208ENST00000497022 NUP210LQ5VU65 1888 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 SMARCA2P51531 1590 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 A0A1B0GV90 55 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 A0A1W2PRE2 83 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 TRAPPC13A5PLN9 417 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 MEIS3P1A6NDR6 274 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 HMSDA8MTL9 139 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 CLDN25C9JDP6 229 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 TRAPPC2LH3BP13 241 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 BUB1B-PAK6H3BSN5 160 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 ZNF737O75373 536 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 NAPSAO96009 420 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 C1QCP02747 245 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 HMGN1P05114 100 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 METTL15P1P0C7V9 234 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 TRGC1P0CF51 173 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 S100A4P26447 101 aaKnown RBP0.8□□□□□ -2.28
VPS26A-208ENST00000497022 CASP1P29466 404 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 ATP5G3P48201 142 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 AQP4P55087 323 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 CDC42P60953 191 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 RHOBP62745 196 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 LTC4SQ16873 150 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 Q5XG85 94 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 TRIQKQ629K1 86 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 C3orf33Q6P1S2 294 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 GOLT1AQ6ZVE7 132 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 MIR17HGQ75NE6 70 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 TMED4Q7Z7H5 227 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 CLVS1Q8IUQ0 354 aaPredicted RBP0.8□□□□□ -2.28
VPS26A-208ENST00000497022 TMEM86AQ8N2M4 240 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 ZNF439Q8NDP4 499 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 OR8B3Q8NGG8 313 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 PFN4Q8NHR9 129 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 SPACA4Q8TDM5 124 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 DNAJC9Q8WXX5 260 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 HSPB9Q9BQS6 159 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 RNF122Q9H9V4 155 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 JPT1Q9UK76 154 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 BAIAP2Q9UQB8 552 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 INTS1Q8N201 2190 aaKnown RBP0.8□□□□□ -2.28
VPS26A-208ENST00000497022 FOCADQ5VW36 1801 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 UHRF1BP1Q6BDS2 1440 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 SBF1O95248 1867 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 PXDNLA1KZ92 1463 aa0.8□□□□□ -2.28
VPS26A-208ENST00000497022 CEP192Q8TEP8 1941 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 TOPBP1Q92547 1522 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 EXPH5Q8NEV8 1989 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 SYNJ1O43426 1573 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 ADGBQ8N7X0 1667 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 ALPK2Q86TB3 2170 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 STRCQ7RTU9 1775 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 TRAV4A0A0B4J268 109 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 A0A0D9SG52 128 aa0.79□□□□□ -2.28
VPS26A-208ENST00000497022 A0A1B0GV72 72 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms