RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	SNAPIN	O95295	136 aa		14.57	□□□□□ -0.08
ABCA2-222	ENST00000494046	EGR2	P11161	476 aa	Predicted RBP	14.57	□□□□□ -0.08
ABCA2-222	ENST00000494046	GNB1	P62873	340 aa		14.57	□□□□□ -0.08
ABCA2-222	ENST00000494046	SPINK9	Q5DT21	86 aa		14.57	□□□□□ -0.08
ABCA2-222	ENST00000494046	VKORC1L1	Q8N0U8	176 aa		14.57	□□□□□ -0.08
ABCA2-222	ENST00000494046	TPSG1	Q9NRR2	321 aa		14.57	□□□□□ -0.08
ABCA2-222	ENST00000494046	UBE2L5P	A0A1B0GUS4	154 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	C15orf61	A6NNL5	157 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	SEC14L6	B5MCN3	397 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046		C9JQL5	133 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	FHL3	Q13643	280 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	RTL8B	Q17RB0	113 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	C19orf54	Q5BKX5	351 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	OR1N2	Q8NGR9	330 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	RHOV	Q96L33	236 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	SMDT1	Q9H4I9	107 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	SLC35D1	Q9NTN3	355 aa		14.56	□□□□□ -0.08
ABCA2-222	ENST00000494046	TRAV3	A0A0B4J244	114 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	C15orf62	A8K5M9	175 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	DNASE2	O00115	360 aa	Predicted RBP	14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	CA2	P00918	260 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	APOA2	P02652	100 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	TAGLN	Q01995	201 aa	Known RBP	14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	ASPHD1	Q5U4P2	390 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	OR4A47	Q6IF82	309 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	PPP1R27	Q86WC6	154 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	RNF5	Q99942	180 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	AIFM2	Q9BRQ8	373 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	FOXA2	Q9Y261	457 aa	Predicted RBP	14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046		A0A1B0GV50	99 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	SLC25A17	O43808	307 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	PPT1	P50897	306 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	VWC2	Q2TAL6	325 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	C9orf66	Q5T8R8	295 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	UNQ5815/PRO19632	Q6UWF5	114 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	PDPN	Q86YL7	162 aa		14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	FLYWCH2	Q96CP2	140 aa	Known RBP	14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	HEYL	Q9NQ87	328 aa	Predicted RBP	14.55	□□□□□ -0.08
ABCA2-222	ENST00000494046	TRAV1-1	A0A0B4J248	108 aa		14.54	□□□□□ -0.08
ABCA2-222	ENST00000494046	CRIP2	P52943	208 aa	Predicted RBP	14.54	□□□□□ -0.08
ABCA2-222	ENST00000494046	CCL20	P78556	96 aa		14.54	□□□□□ -0.08
ABCA2-222	ENST00000494046	SFT2D1	Q8WV19	159 aa		14.54	□□□□□ -0.08
ABCA2-222	ENST00000494046	MS4A10	Q96PG2	267 aa		14.54	□□□□□ -0.08
ABCA2-222	ENST00000494046	RPRM	Q9NS64	109 aa		14.54	□□□□□ -0.08
ABCA2-222	ENST00000494046	COL7A1	Q02388	2944 aa		14.54	□□□□□ -0.08
ABCA2-222	ENST00000494046	RBFOX3	A6NFN3	312 aa		14.53	□□□□□ -0.08
ABCA2-222	ENST00000494046	HSPE1	P61604	102 aa	Known RBP	14.53	□□□□□ -0.08
ABCA2-222	ENST00000494046	TMEM41B	Q5BJD5	291 aa		14.53	□□□□□ -0.08
ABCA2-222	ENST00000494046	ZNF562	Q6V9R5	426 aa		14.53	□□□□□ -0.08
ABCA2-222	ENST00000494046	PRR25	Q96S07	402 aa		14.53	□□□□□ -0.08
ABCA2-222	ENST00000494046	TMEM14B	Q9NUH8	114 aa		14.53	□□□□□ -0.08
ABCA2-222	ENST00000494046	IFNA10	P01566	189 aa		14.52	□□□□□ -0.08
ABCA2-222	ENST00000494046	IL6R	P08887	468 aa	Predicted RBP	14.52	□□□□□ -0.08
ABCA2-222	ENST00000494046	FGF7	P21781	194 aa		14.52	□□□□□ -0.08
ABCA2-222	ENST00000494046	HOXA1	P49639	335 aa	Predicted RBP	14.52	□□□□□ -0.08
ABCA2-222	ENST00000494046	MBD3L1	Q8WWY6	194 aa		14.52	□□□□□ -0.08
ABCA2-222	ENST00000494046	SLC35B3	Q9H1N7	401 aa		14.52	□□□□□ -0.08
ABCA2-222	ENST00000494046	PRND	Q9UKY0	176 aa		14.52	□□□□□ -0.08
ABCA2-222	ENST00000494046	IGHV3-11	P01762	117 aa		14.52	□□□□□ -0.09
ABCA2-222	ENST00000494046	CD69	Q07108	199 aa		14.52	□□□□□ -0.09
ABCA2-222	ENST00000494046	FXYD3	Q14802	87 aa		14.52	□□□□□ -0.09
ABCA2-222	ENST00000494046	OSR1	Q8TAX0	266 aa	Predicted RBP	14.52	□□□□□ -0.09
ABCA2-222	ENST00000494046	ARPC1A	Q92747	370 aa		14.52	□□□□□ -0.09
ABCA2-222	ENST00000494046	VSIR	Q9H7M9	311 aa		14.52	□□□□□ -0.09
ABCA2-222	ENST00000494046	FAM74A7	A6NL05	159 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	UPK2	O00526	184 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	IGLV2-23	P01705	113 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	MB	P02144	154 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	NPBWR1	P48145	328 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	SLURP1	P55000	103 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	RAB11A	P62491	216 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	FAM74A3	Q4VXF1	159 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	AKIRIN2	Q53H80	203 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	GGACT	Q9BVM4	153 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	ENY2	Q9NPA8	101 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	BET1L	Q9NYM9	111 aa		14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	ZMAT5	Q9UDW3	170 aa	Known RBP	14.51	□□□□□ -0.09
ABCA2-222	ENST00000494046	C17orf112	F2Z3M2	114 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	TSPAN4	O14817	238 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	NUPL2	O15504	423 aa	Known RBP	14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	CNIH1	O95406	144 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	TPPP2	P59282	170 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	SSBP2	P81877	361 aa	Predicted RBP	14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	ZNF506	Q5JVG8	444 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	ZNF709	Q8N972	641 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	CLRN3	Q8NCR9	226 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	HARBI1	Q96MB7	349 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	ZNF257	Q9Y2Q1	563 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	OR51B2	Q9Y5P1	312 aa		14.5	□□□□□ -0.09
ABCA2-222	ENST00000494046	IGHV4OR15-8	A0A075B7B6	117 aa		14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046		A0A087WW49	117 aa		14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	SRRM4	A7MD48	611 aa	Known RBP	14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	KBTBD11	O94819	623 aa		14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	LGALS1	P09382	135 aa	Known RBP	14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	ELL	P55199	621 aa	Predicted RBP	14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	ZNF726P1	Q15940	193 aa		14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	TMEM177	Q53S58	311 aa		14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	OR5T1	Q8NG75	326 aa		14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	DLX4	Q92988	240 aa	Predicted RBP	14.49	□□□□□ -0.09
ABCA2-222	ENST00000494046	RARRES2	Q99969	163 aa		14.49	□□□□□ -0.09

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms