RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
SGIP1-213ENST00000493564 ZFAND3Q9H8U3 227 aa7.06□□□□□ -1.28
SGIP1-213ENST00000493564 RETNQ9HD89 108 aa7.06□□□□□ -1.28
SGIP1-213ENST00000493564 TMED3Q9Y3Q3 217 aa7.06□□□□□ -1.28
SGIP1-213ENST00000493564 U3KQ87 197 aa7.06□□□□□ -1.28
SGIP1-213ENST00000493564 DUXBA0A1W2PPF3 345 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 RPS10-NUDT3A0A1W2PQS6 291 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 WRBO00258 174 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 TSPAN4O14817 238 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 DFFBO76075 338 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 OR10J1P30954 320 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 LYG2Q86SG7 212 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 WWC2-AS2Q96NR7 200 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 CITED4Q96RK1 184 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 TM2D3Q9BRN9 247 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 CACFD1Q9UGQ2 172 aa7.05□□□□□ -1.28
SGIP1-213ENST00000493564 TENM3Q9P273 2699 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 TRAV30A0A087WSZ9 112 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 PIGBOS1A0A0B4J2F0 54 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 TCRBP04435 133 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 IGLC1P0CG04 106 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 SLC25A4P12235 298 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 NPPCP23582 126 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 RPL11P62913 178 aaKnown RBP7.04□□□□□ -1.28
SGIP1-213ENST00000493564 ZNF124Q15973 351 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 ETFRF1Q6IPR1 90 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 LINC00322Q6ZN03 302 aaPredicted RBP7.04□□□□□ -1.28
SGIP1-213ENST00000493564 TCF24Q7RTU0 167 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 NOXA1Q86UR1 476 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 COQ8AQ8NI60 647 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 Q8WTZ3 238 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 SPAG8Q99932 426 aaPredicted RBP7.04□□□□□ -1.28
SGIP1-213ENST00000493564 GINS3Q9BRX5 216 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 C20orf85Q9H1P6 137 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 PLA2G2EQ9NZK7 142 aa7.04□□□□□ -1.28
SGIP1-213ENST00000493564 STAB2Q8WWQ8 2551 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 H3BP45 60 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 SYNGR2O43760 224 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 MED6O75586 246 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 IFNA21P01568 189 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 SLC25A6P12236 298 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 POLR2GP62487 172 aaKnown RBP eCLIP7.03□□□□□ -1.28
SGIP1-213ENST00000493564 GAMTQ14353 236 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 SPANXN5Q5MJ07 72 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 FAM90A2PQ658T7 463 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 OR1S2Q8NGQ3 325 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 METTL26Q96S19 204 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 SEC22CQ9BRL7 303 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 CCDC32Q9BV29 185 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 GSKIPQ9P0R6 139 aa7.03□□□□□ -1.28
SGIP1-213ENST00000493564 LOC102724200A0A096LPH7 203 aaPredicted RBP7.02□□□□□ -1.29
SGIP1-213ENST00000493564 FAM240BA0A1B0GVZ2 78 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 OR4C46A6NHA9 309 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 FAM90A26D6RGX4 464 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 DNASE2O00115 360 aaPredicted RBP7.02□□□□□ -1.29
SGIP1-213ENST00000493564 CCSO14618 274 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 SCGB2A1O75556 95 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 SCGB1D2O95969 90 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 IL4P05112 153 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 RD3LP0DJH9 198 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 RPL35AP18077 110 aaKnown RBP7.02□□□□□ -1.29
SGIP1-213ENST00000493564 GPX4P36969 197 aaPredicted RBP7.02□□□□□ -1.29
SGIP1-213ENST00000493564 YPEL3P61236 119 aaPredicted RBP7.02□□□□□ -1.29
SGIP1-213ENST00000493564 RAB11AP62491 216 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 ID3Q02535 119 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 ZNF90Q03938 601 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 ODF3L2Q3SX64 289 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 S100ZQ8WXG8 99 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 SPATA25Q9BR10 227 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 MS4A6AQ9H2W1 248 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 VSIRQ9H7M9 311 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 NUDT15Q9NV35 164 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 TBC1D24Q9ULP9 559 aa7.02□□□□□ -1.29
SGIP1-213ENST00000493564 IGKV1D-37A0A075B6S9 117 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 ZFP92A6NM28 416 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 FAM25EA8MYX2 175 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 SSSCA1O60232 199 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 H2AFB2P0C5Z0 115 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 PSG1P11464 419 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 CRYBB3P26998 211 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 NKX2-1P43699 371 aaPredicted RBP7.01□□□□□ -1.29
SGIP1-213ENST00000493564 P2RY1P47900 373 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 ATP5IP56385 69 aaPredicted RBP7.01□□□□□ -1.29
SGIP1-213ENST00000493564 PAFAH1B2P68402 229 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 RPP30P78346 268 aaKnown RBP7.01□□□□□ -1.29
SGIP1-213ENST00000493564 IFITM3Q01628 133 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 OR2F1Q13607 317 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 USF2Q15853 346 aaPredicted RBP7.01□□□□□ -1.29
SGIP1-213ENST00000493564 IAH1Q2TAA2 248 aaPredicted RBP7.01□□□□□ -1.29
SGIP1-213ENST00000493564 FAM24BQ8N5W8 94 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 OR51G1Q8NGK1 321 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 OR4D5Q8NGN0 318 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 MITD1Q8WV92 249 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 SLC35E1Q96K37 410 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 CIB3Q96Q77 187 aaPredicted RBP7.01□□□□□ -1.29
SGIP1-213ENST00000493564 PSENENQ9NZ42 101 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 PTTG2Q9NZH5 202 aa7.01□□□□□ -1.29
SGIP1-213ENST00000493564 RABAC1Q9UI14 185 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms