RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PPT1P50897 306 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 RAB9AP51151 201 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 TAS2R43P59537 309 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 DEFB1P60022 68 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF616Q08AN1 781 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 TPBGQ13641 420 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 EXOSC2Q13868 293 aaKnown RBP2.06□□□□□ -2.08
PTCD3-218ENST00000493430 FXYD3Q14802 87 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 KCTD21Q4G0X4 260 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 ACTBL2Q562R1 376 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 VAX1Q5SQQ9 334 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 GLT8D1Q68CQ7 371 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 UNQ9165/PRO28630Q6UXU0 137 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 IL34Q6ZMJ4 242 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 ERASQ7Z444 233 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 H1FOOQ8IZA3 346 aaPredicted RBP2.06□□□□□ -2.08
PTCD3-218ENST00000493430 DEFB125Q8N687 156 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF565Q8N9K5 539 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 CCDC54Q8NEL0 328 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 BEST4Q8NFU0 473 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 OR10R2Q8NGX6 335 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 OR51H1Q8NH63 302 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 KCNG3Q8TAE7 436 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 C4orf3Q8WVX3 66 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 SRSF12Q8WXF0 261 aaKnown RBP2.06□□□□□ -2.08
PTCD3-218ENST00000493430 GALMQ96C23 342 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 RAB3CQ96E17 227 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 YPEL2Q96QA6 119 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 RAB40CQ96S21 281 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 ST6GALNAC5Q9BVH7 336 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 SCRT1Q9BWW7 348 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 CST11Q9H112 138 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 C12orf4Q9NQ89 552 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 KCNIP1Q9NZI2 227 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 MRPL36Q9P0J6 103 aaKnown RBP2.06□□□□□ -2.08
PTCD3-218ENST00000493430 U3KQK5 164 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 V9GY05 133 aa2.06□□□□□ -2.08
PTCD3-218ENST00000493430 TRBV6-7A0A0A0MS04 114 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 A0A0G2JRQ6 117 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 TRDV1A0A1B0GX56 115 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 IRGMA1A4Y4 181 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RBMY1BA6NDE4 496 aaKnown RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RBMY1EA6NEQ0 496 aaKnown RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 OOSP1A8MZH6 123 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 TRDCB7Z8K6 153 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 LINC01619G3V211 115 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 DEFB4AO15263 64 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 HPGDSO60760 199 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 CNIH1O95406 144 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 PMP2P02689 132 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 GLAP06280 429 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RBMY1DP0C7P1 496 aaKnown RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 CD37P11049 281 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 CD36P16671 472 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RAB3BP20337 219 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 GZMHP20718 246 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 CD1BP29016 333 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 MYCNOSP40205 109 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 TFPI2P48307 235 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 KCNJ3P48549 501 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 VBP1P61758 197 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 SLC35B1P78383 322 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RHOGP84095 191 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 PITPNAQ00169 270 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 PAX5Q02548 391 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 EIF4EBP1Q13541 118 aaPredicted RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 GPR176Q14439 515 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 KIR2DS1Q14954 304 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 CDNFQ49AH0 187 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 SFXN4Q6P4A7 337 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 CLEC19AQ6UXS0 136 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 ZNF818PQ6ZRF7 136 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 PRSS48Q7RTY5 328 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 LINC00596Q86U02 117 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 SNX29P2Q8IUI4 249 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 FAM24BQ8N5W8 94 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 NPBQ8NG41 125 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 OR13F1Q8NGS4 319 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 TCTEX1D2Q8WW35 142 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 MRPL48Q96GC5 212 aaKnown RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 AKR1E2Q96JD6 320 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 PHB2Q99623 299 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 B9D2Q9BPU9 175 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 UQCC2Q9BRT2 126 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 GINS4Q9BRT9 223 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 DCUN1D5Q9BTE7 237 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 HINT2Q9BX68 163 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RHBDL2Q9NX52 303 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 SCN3BQ9NY72 215 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 ABRACLQ9P1F3 81 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 MLXQ9UH92 298 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RBMX2Q9Y388 322 aaKnown RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 TPRKBQ9Y3C4 175 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 RBM7Q9Y580 266 aaKnown RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 NUBP2Q9Y5Y2 271 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 DNAH1Q9P2D7 4330 aa2.05□□□□□ -2.08
PTCD3-218ENST00000493430 PLECQ15149 4684 aaKnown RBP2.05□□□□□ -2.08
PTCD3-218ENST00000493430 TRBV6-6A0A0A6YYG2 114 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 FAM240BA0A1B0GVZ2 78 aa2.04□□□□□ -2.08
PTCD3-218ENST00000493430 IGLC7A0M8Q6 106 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms