RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 KIR3DL3Q8N743 410 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 SLC25A20O43772 301 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 VMO1Q7Z5L0 202 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 NRN1Q9NPD7 142 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 SCN2AQ99250 2005 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 B4DSR2 109 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 SERF1AO75920 110 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 A0A1B0GWB2 263 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 C21orf62-AS1Q17RA5 79 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 ATP5L2Q7Z4Y8 100 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 NEUROG3Q9Y4Z2 214 aa13.47□□□□□ -0.25
BRAT1-206ENST00000493232 H0YIZ8 118 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 APOMO95445 188 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 CRPP02741 224 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 IGKV1D-8A0A087WSZ0 117 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 TMEM200BQ69YZ2 307 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 BEND2Q8NDZ0 799 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 TSKUQ8WUA8 353 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 A0A087WV48 116 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 DPM2O94777 84 aa13.46□□□□□ -0.25
BRAT1-206ENST00000493232 M0R1W7 72 aa13.46□□□□□ -0.26
BRAT1-206ENST00000493232 RNF182Q8N6D2 247 aa13.46□□□□□ -0.26
BRAT1-206ENST00000493232 SEPSECSQ9HD40 501 aaKnown RBP13.46□□□□□ -0.26
BRAT1-206ENST00000493232 HEATR5BQ9P2D3 2071 aa13.46□□□□□ -0.26
BRAT1-206ENST00000493232 FOXG1P55316 489 aaPredicted RBP13.45□□□□□ -0.26
BRAT1-206ENST00000493232 GFI1Q99684 422 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 GNB1LQ9BYB4 327 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 IGHV1-3A0A0C4DH29 117 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 NAPSAO96009 420 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 TREML4Q6UXN2 200 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 MDS2Q8NDY4 140 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 MESP1Q9BRJ9 268 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 FGF16O43320 207 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 SNAI2O43623 268 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 ABCA7Q8IZY2 2146 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 PGPEP1Q9NXJ5 209 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 TET1Q8NFU7 2136 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 ADMP35318 185 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 LINC01559Q495D7 138 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 LHFPL1Q86WI0 220 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 ST6GALNAC6Q969X2 333 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 COQ2Q96H96 371 aa13.45□□□□□ -0.26
BRAT1-206ENST00000493232 A0A1B0GWJ7 208 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 LINC00614P0C842 121 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 C15orf32Q32M92 178 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 OR10W1Q8NGF6 305 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 CHCHD1Q96BP2 118 aaKnown RBP13.44□□□□□ -0.26
BRAT1-206ENST00000493232 SSBP4Q9BWG4 385 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-206ENST00000493232 MLNRO43193 412 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 CD28P10747 220 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 NSUN5P1Q3KNT7 163 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 SPCS1Q9Y6A9 102 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 MBD3L4A6NDZ8 208 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-206ENST00000493232 MBD3L3A6NE82 208 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-206ENST00000493232 MBD3L5A6NJ08 208 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-206ENST00000493232 TEX38Q6PEX7 206 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 MBD3L2Q8NHZ7 208 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-206ENST00000493232 OCC1Q8TAD7 63 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
BRAT1-206ENST00000493232 C5orf30Q96GV9 206 aa13.44□□□□□ -0.26
BRAT1-206ENST00000493232 TRGV9Q99603 122 aa13.43□□□□□ -0.26
BRAT1-206ENST00000493232 GGTLC1Q9BX51 225 aa13.43□□□□□ -0.26
BRAT1-206ENST00000493232 PGPEP1LA6NFU8 196 aa13.43□□□□□ -0.26
BRAT1-206ENST00000493232 WFDC1Q9HC57 220 aa13.43□□□□□ -0.26
BRAT1-206ENST00000493232 ST6GALNAC3Q8NDV1 305 aa13.43□□□□□ -0.26
BRAT1-206ENST00000493232 TRBV6-6A0A0A6YYG2 114 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 GAS1P54826 345 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 Q0VFX4 171 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 CD177Q8N6Q3 437 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 DOCK4Q8N1I0 1966 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 A0A1B0GV90 55 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 PLNP26678 52 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 C9orf139Q6ZV77 190 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 VGLL1Q99990 258 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 PRADC1Q9BSG0 188 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 SLC25A2Q9BXI2 301 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 TRBV7-1A0A0A6YYK4 115 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 NIT1Q86X76 327 aa13.42□□□□□ -0.26
BRAT1-206ENST00000493232 CHTOPQ9Y3Y2 248 aaKnown RBP13.42□□□□□ -0.26
BRAT1-206ENST00000493232 A0A0G2JMZ2 1700 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 LRRC37A2A6NM11 1700 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 IGKV1-27A0A075B6S5 117 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 PSPNO60542 156 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 DTX1Q86Y01 620 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 ADARB2-AS1A8MUL3 147 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 SAP30O75446 220 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 CLPSP04118 112 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 A0A0G2JNJ9 132 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 SELLP14151 372 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 C10orf55Q5SWW7 151 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 Q9UFV3 132 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 LDLRAD4O15165 306 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 SNRNP200O75643 2136 aaKnown RBP13.41□□□□□ -0.26
BRAT1-206ENST00000493232 IGHG3P01860 377 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 PSG1P11464 419 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 LINC00527Q9UJ94 153 aa13.41□□□□□ -0.26
BRAT1-206ENST00000493232 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms