RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FZR1Q9UM11 496 aa15.72■□□□□ 0.11
SNAPC3-206ENST00000490969 LYZL6O75951 148 aa15.72■□□□□ 0.11
SNAPC3-206ENST00000490969 HIST1H1EP10412 219 aaKnown RBP15.72■□□□□ 0.11
SNAPC3-206ENST00000490969 IGHV1-2P23083 117 aa15.72■□□□□ 0.11
SNAPC3-206ENST00000490969 PRNDQ9UKY0 176 aa15.72■□□□□ 0.11
SNAPC3-206ENST00000490969 IGHV1-24A0A0C4DH33 117 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 PEX7O00628 323 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 REG1BP48304 166 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 PRCDQ00LT1 54 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 CR1LQ2VPA4 569 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 TNCP24821 2201 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 IGKV1D-17A0A075B6S4 117 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 SAA2P0DJI9 122 aaPredicted RBP15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 ZNF329Q86UD4 541 aa15.71■□□□□ 0.11
SNAPC3-206ENST00000490969 PSMB11A5LHX3 300 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 MGST3O14880 152 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 SSX8Q7RTT4 187 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 HSBP1L1C9JCN9 74 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 LEPROTL1O95214 131 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 PYYP10082 97 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 FOXA3P55318 350 aaPredicted RBP15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 CT45A1Q5HYN5 189 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 CT45A3Q8NHU0 189 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 CHCHD1Q96BP2 118 aaKnown RBP15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 TMEM191AQ9H0A3 160 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 C7orf69Q9H7B7 122 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 CALYQ9NYX4 217 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 ZNF257Q9Y2Q1 563 aa15.7■□□□□ 0.1
SNAPC3-206ENST00000490969 K7EM74 188 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 PSG9Q00887 426 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 C2orf83Q53S99 150 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 VWA1Q6PCB0 445 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 SCRT2Q9NQ03 307 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 KLK10O43240 276 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 FABP6P51161 128 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 HBBP68871 147 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 POU2AF1Q16633 256 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 INO80CQ6PI98 192 aaPredicted RBP15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 CSTL1Q9H114 145 aa15.69■□□□□ 0.1
SNAPC3-206ENST00000490969 CD5LO43866 347 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 NHLH1Q02575 133 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 ZNF841Q6ZN19 808 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 PPP1R35Q8TAP8 253 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 PRR14LQ5THK1 2151 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 CD69Q07108 199 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 FOXC1Q12948 553 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 IGFL2Q6UWQ7 119 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 PAXXQ9BUH6 204 aa15.68■□□□□ 0.1
SNAPC3-206ENST00000490969 GAGE12BA1L429 117 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 UPK2O00526 184 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 HLA-DRB1P01911 266 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 CD24P25063 80 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 TCF24Q7RTU0 167 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 ZNRF1Q8ND25 227 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 IGF2RP11717 2491 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 RP1L1Q8IWN7 2480 aaPredicted RBP15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 TRGV5A0A0B4J1U4 118 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 K7ERU9 68 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 AGFG2O95081 481 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 RNASE2P10153 161 aaKnown RBP15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 TMEM178AQ8NBL3 297 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 ZZEF1O43149 2961 aa15.67■□□□□ 0.1
SNAPC3-206ENST00000490969 IGHV3OR15-7A0A075B7D8 119 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 TEX50A0A1B0GTY4 177 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 ATP5IP56385 69 aaPredicted RBP15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 FAM71F2Q6NXP2 309 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 ZNF714Q96N38 554 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 ZNF835Q9Y2P0 537 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 NBEAQ8NFP9 2946 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 TRAV8-6A0A0B4J262 113 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 GNG5P63218 68 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 OR1L8Q8NGR8 309 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 ADTRPQ96IZ2 230 aa15.66■□□□□ 0.1
SNAPC3-206ENST00000490969 A0A087X0K7 114 aa15.65■□□□□ 0.1
SNAPC3-206ENST00000490969 SRRM5B3KS81 715 aa15.65■□□□□ 0.1
SNAPC3-206ENST00000490969 HIST1H1AQ02539 215 aaPredicted RBP15.65■□□□□ 0.1
SNAPC3-206ENST00000490969 COX7A2P2O60397 106 aa15.65■□□□□ 0.1
SNAPC3-206ENST00000490969 C17orf58Q2M2W7 97 aa15.65■□□□□ 0.1
SNAPC3-206ENST00000490969 PEF1Q9UBV8 284 aaKnown RBP15.65■□□□□ 0.1
SNAPC3-206ENST00000490969 CGB3P0DN86 165 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 CGB7P0DN87 165 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 SCNM1Q9BWG6 230 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 MAP1LC3CQ9BXW4 147 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 MS4A6AQ9H2W1 248 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 LOC102724200A0A096LPH7 203 aaPredicted RBP15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 SRRM4A7MD48 611 aaKnown RBP15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 CEACAM4O75871 244 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 IGKV3-15P01624 115 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 S100A7P31151 101 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 C10orf113Q5VZT2 155 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 PET117Q6UWS5 81 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 SGK494Q96LW2 274 aa15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 MCRIP2Q9BUT9 160 aaKnown RBP15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 RPP21Q9H633 154 aaKnown RBP15.64■□□□□ 0.09
SNAPC3-206ENST00000490969 LIPFP07098 398 aa15.63■□□□□ 0.09
SNAPC3-206ENST00000490969 OR10W1Q8NGF6 305 aa15.63■□□□□ 0.09
SNAPC3-206ENST00000490969 FXYD5Q96DB9 178 aa15.63■□□□□ 0.09
SNAPC3-206ENST00000490969 IGKV1-16P04430 117 aa15.63■□□□□ 0.09
SNAPC3-206ENST00000490969 OR5AL1P0C617 328 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms