RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 RNF2Q99496 336 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 SPAG8Q99932 426 aaPredicted RBP6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 KCNIP3Q9Y2W7 256 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 SMAD5-AS1Q9Y6J3 95 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 PIGBOS1A0A0B4J2F0 54 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 DEFA4P12838 97 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 SEPSECSQ9HD40 501 aaKnown RBP6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 RELQ04864 619 aaPredicted RBP6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 ARL16Q0P5N6 197 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 FAM106AQ4KMX7 169 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 ZNF600Q6ZNG1 722 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 TRGV9Q99603 122 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 MCUBQ9NWR8 336 aa6.78□□□□□ -1.32
SUPT20H-220ENST00000490716 IGHV3-21A0A0B4J1V1 117 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 BUB3O43684 328 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 RAB25P57735 213 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 PLET1Q6UQ28 207 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 CSNK1G2-AS1Q8NCQ2 148 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 ST8SIA2Q92186 375 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 NEURL2Q9BR09 285 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 LYL1P12980 280 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 CLUHP3Q96NS8 147 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 K7EQG2 157 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 IGHV3-48P01763 117 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 MBPP02686 304 aaPredicted RBP6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 ATF4P18848 351 aaPredicted RBP6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 NPY1RP25929 384 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 AKR1C2P52895 323 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 BTNL8Q6UX41 500 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 MISP3Q96FF7 219 aa6.77□□□□□ -1.33
SUPT20H-220ENST00000490716 C7orf66A4D0T2 115 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 ANXA3P12429 323 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 ZNF431Q8TF32 576 aaPredicted RBP6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 RRNAD1Q96FB5 475 aaKnown RBP6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 WDR12Q9GZL7 423 aaKnown RBP6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 PALMDQ9NP74 551 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 TRAV30A0A087WSZ9 112 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 SYNGR2O43760 224 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 LY86O95711 162 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 TATDN3Q17R31 274 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 TIGITQ495A1 244 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 SLC16A13Q7RTY0 426 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 ZBTB8BQ8NAP8 495 aaPredicted RBP6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 TSC22D2O75157 780 aa6.76□□□□□ -1.33
SUPT20H-220ENST00000490716 CCDC160A6NGH7 325 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 CCNKO75909 580 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 SLC45A2Q9UMX9 530 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 CYB5BO43169 146 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 HOXA1P49639 335 aaPredicted RBP6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 ZNF846Q147U1 533 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 DEFB125Q8N687 156 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 GRAMD2BQ96HH9 432 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 OVOL2Q9BRP0 275 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 RHPN1-AS1Q9BWJ2 59 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 IFNA17P01571 189 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 SUB1P53999 127 aaKnown RBP eCLIP6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 ZNF90Q03938 601 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 TMED4Q7Z7H5 227 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 TP53TG1Q9Y2A0 90 aa6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 PUS1Q9Y606 427 aaKnown RBP eCLIP6.75□□□□□ -1.33
SUPT20H-220ENST00000490716 SNRPGP15A8MWD9 76 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 TRIQKQ629K1 86 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 ACOT7LQ6ZUV0 252 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 MAP6D1Q9H9H5 199 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 U3KQK5 164 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 TRAV14DV4A0A0A6YYC5 116 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 PSG1P11464 419 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 OR10J1P30954 320 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 NRARPQ7Z6K4 114 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 MS4A6AQ9H2W1 248 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 G3V3Q6 166 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 NUPL2O15504 423 aaKnown RBP6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 CD5P06127 495 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 H2BFSP57053 126 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 OR8G2PQ6IF36 304 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 PATE2Q6UY27 113 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 SEC22CQ9BRL7 303 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 NUDT15Q9NV35 164 aa6.74□□□□□ -1.33
SUPT20H-220ENST00000490716 H0YIZ8 118 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 LINC00869P0C866 280 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 CD81P60033 236 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 NPIPB3Q92617 1050 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 GGACTQ9BVM4 153 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 IGHV3-35A0A0C4DH35 117 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 KIR2DL5BA0A0G2JN68 375 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 KIR2DL5BA0A0G2JPC4 375 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 NPBWR1P48145 328 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 RND2P52198 227 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 KIR2DL5AQ8N109 375 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 KIR2DL5BQ8NHK3 375 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 POLR2GP62487 172 aaKnown RBP eCLIP6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 DLK1P80370 383 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 PRR20EP86478 221 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 PRR20CP86479 221 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 PRR20DP86480 221 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 PRR20BP86481 221 aa6.73□□□□□ -1.33
SUPT20H-220ENST00000490716 PRR20AP86496 221 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms