RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 IGLL5B9A064 214 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM150CB9EJG8 249 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 CCL16O15467 120 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE7O76087 117 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 IGHG4P01861 327 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE12FP0CL80 117 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE12GP0CL81 117 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE12IP0CL82 117 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 GABRG2P18507 467 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 BCL3P20749 454 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 G6PCP35575 357 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 VDAC2P45880 294 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE4Q13068 117 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF146Q15072 292 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 CST6Q15828 149 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 LGALS9BQ3B8N2 356 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 LGALS9CQ6DKI2 356 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 ZFAND6Q6FIF0 208 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.89□□□□□ -1.791e-7■■■■□ 25.5
SNRNP40-206ENST00000489853 H2BFWTQ7Z2G1 175 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 MKXQ8IYA7 352 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 DRAM1Q8N682 238 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF441Q8N8Z8 693 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 SYT8Q8NBV8 401 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 C8orf46Q8TAG6 207 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 PIFOQ8TCI5 191 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 ARPC1AQ92747 370 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 NABP1Q96AH0 204 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 SNRNP40Q96DI7 357 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 C20orf78Q9BR46 151 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 MCRIP2Q9BUT9 160 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 HEYLQ9NQ87 328 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 YAE1D1Q9NRH1 226 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF355PQ9NSJ1 428 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM140Q9NV12 185 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 LSM4Q9Y4Z0 139 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 MYO9BQ13459 2157 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 PCDH15Q96QU1 1955 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 IGKV3D-11A0A0A0MRZ8 115 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 A0A1B0GWB2 263 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 A8MWL6 223 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 SYNGR3O43761 229 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 APOMO95445 188 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 FKBP2P26885 142 aaKnown RBP3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 INSL3P51460 131 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 FOXA3P55318 350 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 PSG5Q15238 335 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 DEFB110Q30KQ9 67 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 KRTAP27-1Q3LI81 207 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 Q6ZR03 302 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 PPP1R32Q7Z5V6 425 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 TEX29Q8N6K0 151 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 MAFAQ8NHW3 353 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 CCL4L1Q8NHW4 92 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 IL1F10Q8WWZ1 152 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 DDB2Q92466 427 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 TSACCQ96A04 125 aaPredicted RBP3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 RAB1BQ9H0U4 201 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 IL23AQ9NPF7 189 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 TRIOO75962 3097 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 MYO15AQ9UKN7 3530 aa3.88□□□□□ -1.79
SNRNP40-206ENST00000489853 A0A087WX48 190 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 FAM90A9PA6NNJ1 464 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 PRSS46E5RG02 174 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 H3BMG7 143 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 MGST3O14880 152 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 NCR2O95944 276 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 GCSHP23434 173 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 XGP55808 180 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 CATR1Q13166 79 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM200BQ69YZ2 307 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 Q6AWC8 147 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 TRAT1Q6PIZ9 186 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 SMRP1Q8NCR6 262 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 OR9G1Q8NH87 305 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 CFHR4Q92496 578 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 PRELID3AQ96N28 172 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 C18orf15Q96N68 181 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 CITED1Q99966 193 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 KRTAP9-8Q9BYQ0 159 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 PLEKHA3Q9HB20 300 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 GCM1Q9NP62 436 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 POLDIP2Q9Y2S7 368 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 PIEZO1Q92508 2521 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 A0A0G2JNJ9 132 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 A0A1W2PQM1 296 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 TCRBV4S1A1TA0A5B7 111 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 NHLRC4P0CG21 123 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 FXYD2P54710 66 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF816Q0VGE8 651 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 EIF4EBP1Q13541 118 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 TAL2Q16559 108 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 MIR17HGQ75NE6 70 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 RPRMLQ8N4K4 120 aa3.87□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF808Q8N4W9 903 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms