RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ETV6P41212 452 aa11.35□□□□□ -0.59
USP48-210ENST00000489108 SCAND1P57086 179 aa11.35□□□□□ -0.59
USP48-210ENST00000489108 IDNKQ5T6J7 187 aa11.35□□□□□ -0.59
USP48-210ENST00000489108 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
USP48-210ENST00000489108 OR5H2Q8NGV7 314 aa11.35□□□□□ -0.59
USP48-210ENST00000489108 Q8WTZ3 238 aa11.35□□□□□ -0.59
USP48-210ENST00000489108 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
USP48-210ENST00000489108 A0A0B4J293 547 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 RPS10-NUDT3A0A1W2PQS6 291 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 NUDT3O95989 172 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 RPL5P46777 297 aaKnown RBP11.34□□□□□ -0.59
USP48-210ENST00000489108 HOXA1P49639 335 aaPredicted RBP11.34□□□□□ -0.59
USP48-210ENST00000489108 DHODHQ02127 395 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 USF2Q15853 346 aaPredicted RBP11.34□□□□□ -0.59
USP48-210ENST00000489108 SIGLEC15Q6ZMC9 328 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 OR4B1Q8NGF8 309 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 C7orf50Q9BRJ6 194 aaKnown RBP11.34□□□□□ -0.59
USP48-210ENST00000489108 SAV1Q9H4B6 383 aaPredicted RBP11.34□□□□□ -0.59
USP48-210ENST00000489108 ANAPC10Q9UM13 185 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 LINC00588Q9Y4M8 146 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 FAT1Q14517 4588 aa11.34□□□□□ -0.59
USP48-210ENST00000489108 BUB3O43684 328 aa11.33□□□□□ -0.6
USP48-210ENST00000489108 S100GP29377 79 aa11.33□□□□□ -0.6
USP48-210ENST00000489108 TAS2R46P59540 309 aa11.33□□□□□ -0.6
USP48-210ENST00000489108 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
USP48-210ENST00000489108 LYSMD2Q8IV50 215 aa11.33□□□□□ -0.6
USP48-210ENST00000489108 LINC00052Q96N35 136 aa11.33□□□□□ -0.6
USP48-210ENST00000489108 EBAG9O00559 213 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 NAT1P18440 290 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 CCL18P55774 89 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 TAS2R20P59543 309 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 YPEL3P61236 119 aaPredicted RBP11.32□□□□□ -0.6
USP48-210ENST00000489108 LPCAT3Q6P1A2 487 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 OR1S2Q8NGQ3 325 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 SSR3Q9UNL2 185 aa11.32□□□□□ -0.6
USP48-210ENST00000489108 IL4P05112 153 aa11.31□□□□□ -0.6
USP48-210ENST00000489108 HRH1P35367 487 aa11.31□□□□□ -0.6
USP48-210ENST00000489108 PSG9Q00887 426 aa11.31□□□□□ -0.6
USP48-210ENST00000489108 FOXI2Q6ZQN5 318 aa11.31□□□□□ -0.6
USP48-210ENST00000489108 PDCD10Q9BUL8 212 aa11.31□□□□□ -0.6
USP48-210ENST00000489108 WDR12Q9GZL7 423 aaKnown RBP11.31□□□□□ -0.6
USP48-210ENST00000489108 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
USP48-210ENST00000489108 PRM2P04554 102 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 P0C879 139 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 HLA-DMAP28067 261 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 OR10J1P30954 320 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 RND2P52198 227 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 TSPAN5P62079 268 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 PRSS54Q6PEW0 395 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 NRG4Q8WWG1 115 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 MAGT1Q9H0U3 335 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 Q9H8V8 135 aa11.3□□□□□ -0.6
USP48-210ENST00000489108 F5H768 121 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 F6UB75 175 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 PSMB9P28065 219 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 ALDH3B2P48448 385 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 RORCP51449 518 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 ZNF79Q15937 498 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 S100A16Q96FQ6 103 aaKnown RBP11.29□□□□□ -0.6
USP48-210ENST00000489108 KRTAP1-5Q9BYS1 174 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 SCPEP1Q9HB40 452 aa11.29□□□□□ -0.6
USP48-210ENST00000489108 M0QYG6 137 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 GSTZ1O43708 216 aaPredicted RBP11.28□□□□□ -0.6
USP48-210ENST00000489108 DEFB130BP0DP73 79 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 DEFB130AP0DP74 79 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 BTF3P20290 206 aaKnown RBP11.28□□□□□ -0.6
USP48-210ENST00000489108 ID1P41134 155 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 HSPA13P48723 471 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 AKR1C2P52895 323 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 DLK1P80370 383 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 FCN2Q15485 313 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 SSX7Q7RTT5 188 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 KLK11Q9UBX7 282 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 BLOC1S6Q9UL45 172 aa11.28□□□□□ -0.6
USP48-210ENST00000489108 ZNF705GA8MUZ8 300 aaPredicted RBP11.27□□□□□ -0.61
USP48-210ENST00000489108 NXPH3O95157 252 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 RD3LP0DJH9 198 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 UCP3P55916 312 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 OR51G1Q8NGK1 321 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 COQ8AQ8NI60 647 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 CNBD2Q96M20 576 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 MYCBP2O75592 4640 aa11.27□□□□□ -0.61
USP48-210ENST00000489108 FLG2Q5D862 2391 aaPredicted RBP11.26□□□□□ -0.61
USP48-210ENST00000489108 A0A0G2JRQ6 117 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 LYRM9A8MSI8 78 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 TOMM40O96008 361 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 SLC25A4P12235 298 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 PRSS3P35030 304 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 PSMB3P49720 205 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 XGP55808 180 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 CLINT1Q14677 625 aa11.26□□□□□ -0.61
USP48-210ENST00000489108 Q5VSD8 79 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 380.2 ms