RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 UTP11Q9Y3A2 253 aaKnown RBP1.2□□□□□ -2.22
RFC4-213ENST00000489028 LHFPL6Q9Y693 200 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 PTPRSQ13332 1948 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 WDR90Q96KV7 1748 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 ROCK1Q13464 1354 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 KIF24Q5T7B8 1368 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 DISP1Q96F81 1524 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 APOA2P02652 100 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 RPSAP08865 295 aaKnown RBP1.19□□□□□ -2.22
RFC4-213ENST00000489028 UBBP0CG47 229 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 GNG3P63215 75 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 NNATQ16517 81 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 RRN3P1Q2M238 152 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 BCL2L15Q5TBC7 163 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 FAM173BQ6P4H8 233 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 ZNF826PQ6ZT77 177 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 COA5Q86WW8 74 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 NEK7Q8TDX7 302 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 ZHX1-C8orf76Q96EF9 292 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 YPEL2Q96QA6 119 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 GINS3Q9BRX5 216 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 PBDC1Q9BVG4 233 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 TMEM133Q9H2Q1 129 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 BOLA2Q9H3K6 86 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 BIN3Q9NQY0 253 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 ACER3Q9NUN7 267 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 AMMECR1Q9Y4X0 333 aaPredicted RBP1.19□□□□□ -2.22
RFC4-213ENST00000489028 MAST2Q6P0Q8 1798 aa1.19□□□□□ -2.22
RFC4-213ENST00000489028 MIA2Q96PC5 1412 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 TRGV10A0A0A0MS01 117 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 TMEM212A6NML5 194 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 CST8O60676 142 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 BANF1O75531 89 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 CRPP02741 224 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 CTSDP07339 412 aaPredicted RBP1.18□□□□□ -2.22
RFC4-213ENST00000489028 CRYGAP11844 174 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 GPX2P18283 190 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 SRIP30626 198 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 TAS2R41P59536 307 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 GNG5P63218 68 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 TSNQ15631 228 aaKnown RBP1.18□□□□□ -2.22
RFC4-213ENST00000489028 Q1T7F1 81 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 PCOTHQ58A44 107 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 C3orf33Q6P1S2 294 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 Q6ZQT0 140 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 PHF13Q86YI8 300 aaPredicted RBP1.18□□□□□ -2.22
RFC4-213ENST00000489028 STX19Q8N4C7 294 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 C9orf163Q8N9P6 203 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 OR13D1Q8NGV5 346 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 WFDC5Q8TCV5 224 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 SLAMF6Q96DU3 332 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 MALSU1Q96EH3 234 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 GPER1Q99527 375 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 HOPXQ9BPY8 73 aaPredicted RBP1.18□□□□□ -2.22
RFC4-213ENST00000489028 PBOV1Q9GZY1 135 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 TRABDQ9H4I3 376 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 TAS2R4Q9NYW5 299 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 ATPIF1Q9UII2 106 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 SLC35A3Q9Y2D2 325 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 UFC1Q9Y3C8 167 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 MDC1Q14676 2089 aaKnown RBP1.18□□□□□ -2.22
RFC4-213ENST00000489028 TENM1Q9UKZ4 2725 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 GREB1Q4ZG55 1949 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 TONSLQ96HA7 1378 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 SMARCA4P51532 1647 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 HECW1Q76N89 1606 aa1.18□□□□□ -2.22
RFC4-213ENST00000489028 RTTNQ86VV8 2226 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 DOCK10Q96BY6 2186 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 NCKAP5O14513 1909 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 DOCK3Q8IZD9 2030 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 TRGV2A0A075B6R0 118 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 DUXBA0A1W2PPF3 345 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 RIIAD1A6NNX1 92 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 PPP5D1E7EU14 171 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 TAX1BP3O14907 124 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 GGCTO75223 188 aaKnown RBP1.17□□□□□ -2.22
RFC4-213ENST00000489028 PROSCO94903 275 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 SHBGP04278 402 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 BAALC-AS2P0C853 105 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 FKBP2P26885 142 aaKnown RBP1.17□□□□□ -2.22
RFC4-213ENST00000489028 SERPINB1P30740 379 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 GRINAQ7Z429 371 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 SMIM20Q8N5G0 67 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.17□□□□□ -2.22
RFC4-213ENST00000489028 OR2T10Q8NGZ9 312 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 CANT1Q8WVQ1 401 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 AQP3Q92482 292 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 ADAT3Q96EY9 351 aaPredicted RBP1.17□□□□□ -2.22
RFC4-213ENST00000489028 LYSMD1Q96S90 227 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 CENPHQ9H3R5 247 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 MED29Q9NX70 200 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 VWDEQ8N2E2 1590 aa1.17□□□□□ -2.22
RFC4-213ENST00000489028 PLXNA3P51805 1871 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 SCN10AQ9Y5Y9 1956 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 IGKV1D-42A0A075B6H8 117 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 IGKV1-9A0A0C4DH69 117 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 PFDN1O60925 122 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 FABP1P07148 127 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 IDO1P14902 403 aa1.16□□□□□ -2.22
RFC4-213ENST00000489028 CRYBA4P53673 196 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms