RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ZMAT4Q9H898 229 aa11.89□□□□□ -0.51
CTDSP1-209ENST00000488627 TRAV30A0A087WSZ9 112 aa11.88□□□□□ -0.51
CTDSP1-209ENST00000488627 MPTX1A8MV57 137 aa11.88□□□□□ -0.51
CTDSP1-209ENST00000488627 LYRM1O43325 122 aa11.88□□□□□ -0.51
CTDSP1-209ENST00000488627 ADAP1O75689 374 aa11.88□□□□□ -0.51
CTDSP1-209ENST00000488627 NPIPB3Q92617 1050 aa11.88□□□□□ -0.51
CTDSP1-209ENST00000488627 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
CTDSP1-209ENST00000488627 CCDC32Q9BV29 185 aa11.88□□□□□ -0.51
CTDSP1-209ENST00000488627 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
CTDSP1-209ENST00000488627 ODF3L2Q3SX64 289 aa11.87□□□□□ -0.51
CTDSP1-209ENST00000488627 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
CTDSP1-209ENST00000488627 OR1S2Q8NGQ3 325 aa11.87□□□□□ -0.51
CTDSP1-209ENST00000488627 ST8SIA2Q92186 375 aa11.87□□□□□ -0.51
CTDSP1-209ENST00000488627 TENM3Q9P273 2699 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 IFNA4P05014 189 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 IAPPP10997 89 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 CRYBB3P26998 211 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 OR10J1P30954 320 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 ID3Q02535 119 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 SPATA25Q9BR10 227 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 MAGT1Q9H0U3 335 aa11.86□□□□□ -0.51
CTDSP1-209ENST00000488627 IGHV3-66A0A0C4DH42 116 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 OR4C46A6NHA9 309 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 SYNGR2O43760 224 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 TCRBP04435 133 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 NPPCP23582 126 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 GPX4P36969 197 aaPredicted RBP11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 GAMTQ14353 236 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 C4orf46Q504U0 113 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 TCF24Q7RTU0 167 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 COQ8AQ8NI60 647 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 ACY3Q96HD9 319 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 C20orf85Q9H1P6 137 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 UBQLN2Q9UHD9 624 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 U3KQE9 123 aa11.85□□□□□ -0.51
CTDSP1-209ENST00000488627 SCGB2A1O75556 95 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 MED6O75586 246 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 DFFBO76075 338 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 OR4D5Q8NGN0 318 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 Q8WTZ3 238 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 S100ZQ8WXG8 99 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 CIB3Q96Q77 187 aaPredicted RBP11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 METTL26Q96S19 204 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 TBC1D24Q9ULP9 559 aa11.84□□□□□ -0.51
CTDSP1-209ENST00000488627 IGKV3-7A0A075B6H7 116 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 IGKV1D-37A0A075B6S9 117 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 PRSS46E5RG02 174 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 WRBO00258 174 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 TOMM40O96008 361 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 CD5P06127 495 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 BMI1P35226 326 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 GBGT1Q8N5D6 347 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 RETNQ9HD89 108 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 PTTG2Q9NZH5 202 aa11.83□□□□□ -0.52
CTDSP1-209ENST00000488627 NBEAL2Q6ZNJ1 2754 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 IFNA21P01568 189 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 RD3LP0DJH9 198 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 PSG1P11464 419 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 RAB11AP62491 216 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 GGTLC1Q9BX51 225 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 MS4A6AQ9H2W1 248 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 NUDT15Q9NV35 164 aa11.82□□□□□ -0.52
CTDSP1-209ENST00000488627 TRAV6A0A075B6T7 132 aa11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 A0A1W2PS18 150 aa11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 NKX2-1P43699 371 aaPredicted RBP11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 P2RY1P47900 373 aa11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 TFPI2P48307 235 aa11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 IFITM3Q01628 133 aa11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 ZNF90Q03938 601 aa11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 TMEM231Q9H6L2 316 aa11.81□□□□□ -0.52
CTDSP1-209ENST00000488627 IGKV1OR2-108A0A075B7D4 117 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 TRAV2A0A0B4J234 112 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 IL4P05112 153 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 PAX9P55771 341 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 RPP30P78346 268 aaKnown RBP11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 ASAH1Q13510 395 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 ZNF124Q15973 351 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 SPANXN5Q5MJ07 72 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 APRG1Q8IVJ8 170 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 SLC35E1Q96K37 410 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 MAP6D1Q9H9H5 199 aa11.8□□□□□ -0.52
CTDSP1-209ENST00000488627 PMS2P5A8MQ11 134 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 UPK1BO75841 260 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 HNRNPCP07910 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 H2AFB2P0C5Z0 115 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 CMC4P56277 68 aaPredicted RBP11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 PAFAH1B2P68402 229 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 IAH1Q2TAA2 248 aaPredicted RBP11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 WFDC3Q8IUB2 231 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 FAM24BQ8N5W8 94 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 THAP8Q8NA92 274 aa11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 ZBTB8BQ8NAP8 495 aaPredicted RBP11.79□□□□□ -0.52
CTDSP1-209ENST00000488627 OR51G1Q8NGK1 321 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms