RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SERF1AO75920 110 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 IBA57Q5T440 356 aaKnown RBP20.96■□□□□ 0.95
HLA-C-208ENST00000487245 TMEM136Q6ZRR5 245 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 FAM231DQ6ZW35 169 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 ZNF355PQ9NSJ1 428 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 POLR3KQ9Y2Y1 108 aaPredicted RBP20.96■□□□□ 0.95
HLA-C-208ENST00000487245 INSIG2Q9Y5U4 225 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 PPIAL4CA0A0B4J2A2 164 aa20.95■□□□□ 0.94
HLA-C-208ENST00000487245 LYNX1G3V0Z9 82 aa20.95■□□□□ 0.94
HLA-C-208ENST00000487245 SIAH2O43255 324 aa20.95■□□□□ 0.94
HLA-C-208ENST00000487245 PPIAL4GP0DN37 164 aa20.95■□□□□ 0.94
HLA-C-208ENST00000487245 LYNX1P0DP58 116 aa20.95■□□□□ 0.94
HLA-C-208ENST00000487245 A0A1W2PPI3 338 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 BUB1B-PAK6H3BSN5 160 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 CRYGBP07316 175 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 PAX2Q02962 417 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 ZNF329Q86UD4 541 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 OR8B3Q8NGG8 313 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 OR8B2Q96RD0 313 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 PTPRQQ9UMZ3 2332 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 FRMD6-AS1P0C7T7 363 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 GRNP28799 593 aaKnown RBP20.94■□□□□ 0.94
HLA-C-208ENST00000487245 RPL27AP46776 148 aaKnown RBP20.94■□□□□ 0.94
HLA-C-208ENST00000487245 RITA1Q96K30 269 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 RAB1BQ9H0U4 201 aa20.94■□□□□ 0.94
HLA-C-208ENST00000487245 IGHV1-3A0A0C4DH29 117 aa20.93■□□□□ 0.94
HLA-C-208ENST00000487245 AMY1AP04745 511 aa20.93■□□□□ 0.94
HLA-C-208ENST00000487245 OR10J3Q5JRS4 329 aa20.93■□□□□ 0.94
HLA-C-208ENST00000487245 Q6ZWC4 215 aa20.93■□□□□ 0.94
HLA-C-208ENST00000487245 STXBP6Q8NFX7 210 aa20.93■□□□□ 0.94
HLA-C-208ENST00000487245 FXYD5Q96DB9 178 aa20.93■□□□□ 0.94
HLA-C-208ENST00000487245 RNF5Q99942 180 aa20.93■□□□□ 0.94
HLA-C-208ENST00000487245 IZUMO1RA6ND01 250 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 SSTP61278 116 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 BAGE3Q86Y29 109 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 BAGE2Q86Y30 109 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 TPSG1Q9NRR2 321 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 NBEAQ8NFP9 2946 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 POLEQ07864 2286 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 IGHV3-72A0A0B4J1Y9 119 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 IGLC7A0M8Q6 106 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 HLA-DQA1P01909 254 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 MYCNOSP40205 109 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 ADORA2A-AS1P86434 159 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 FXYD3Q14802 87 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 RASL11AQ6T310 242 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 MBD6Q96DN6 1003 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 NAT8BQ9UHF3 227 aa20.92■□□□□ 0.94
HLA-C-208ENST00000487245 PKDREJQ9NTG1 2253 aa20.91■□□□□ 0.94
HLA-C-208ENST00000487245 PEX7O00628 323 aa20.91■□□□□ 0.94
HLA-C-208ENST00000487245 MGST1P10620 155 aaKnown RBP20.91■□□□□ 0.94
HLA-C-208ENST00000487245 WIPF2Q8TF74 440 aaPredicted RBP20.91■□□□□ 0.94
HLA-C-208ENST00000487245 TRGV9Q99603 122 aa20.91■□□□□ 0.94
HLA-C-208ENST00000487245 MRPL36Q9P0J6 103 aaKnown RBP20.91■□□□□ 0.94
HLA-C-208ENST00000487245 SIGLEC9Q9Y336 463 aa20.91■□□□□ 0.94
HLA-C-208ENST00000487245 A0A1B0GV90 55 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 PYYP10082 97 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 LY6G5BQ8NDX9 201 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 C22orf15Q8WYQ4 148 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 PIEZO2Q9H5I5 2752 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 CORTO00230 105 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 LIPFP07098 398 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 COMPP49747 757 aaPredicted RBP20.9■□□□□ 0.94
HLA-C-208ENST00000487245 TNXAQ16473 311 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 TEX43Q6ZNM6 134 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 RPEQ96AT9 228 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 PERPQ96FX8 193 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 GNB4Q9HAV0 340 aa20.9■□□□□ 0.94
HLA-C-208ENST00000487245 TIMD4Q96H15 378 aa20.89■□□□□ 0.93
HLA-C-208ENST00000487245 TBX15Q96SF7 602 aa20.89■□□□□ 0.93
HLA-C-208ENST00000487245 CHRDL1Q9BU40 450 aa20.89■□□□□ 0.93
HLA-C-208ENST00000487245 SPTBN2O15020 2390 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 BSNQ9UPA5 3926 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 TPTE2P1Q5T6R2 138 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 SMIM12Q96EX1 92 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 MISP3Q96FF7 219 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 CBLN4Q9NTU7 201 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 BRS3P32247 399 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 HSPB9Q9BQS6 159 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 TNFRSF19Q9NS68 423 aa20.88■□□□□ 0.93
HLA-C-208ENST00000487245 ZNF705FA8MVS1 300 aaPredicted RBP20.87■□□□□ 0.93
HLA-C-208ENST00000487245 C22orf46C9J442 243 aa20.87■□□□□ 0.93
HLA-C-208ENST00000487245 ZNF705DP0CH99 300 aaPredicted RBP20.87■□□□□ 0.93
HLA-C-208ENST00000487245 ZNF705BP0CI00 300 aaPredicted RBP20.87■□□□□ 0.93
HLA-C-208ENST00000487245 TMEM183BQ1AE95 376 aa20.87■□□□□ 0.93
HLA-C-208ENST00000487245 LINC00305Q7Z4B0 112 aa20.87■□□□□ 0.93
HLA-C-208ENST00000487245 GRAMD2BQ96HH9 432 aa20.87■□□□□ 0.93
HLA-C-208ENST00000487245 F2Z2F3 143 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 LY6LH3BQJ8 138 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 REG1AP05451 166 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 SNRPCP09234 159 aaKnown RBP20.86■□□□□ 0.93
HLA-C-208ENST00000487245 COX7A1P24310 79 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 PPP1R27Q86WC6 154 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 TMEM116Q8NCL8 245 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 NEU4Q8WWR8 484 aaPredicted RBP20.86■□□□□ 0.93
HLA-C-208ENST00000487245 C20orf144Q9BQM9 153 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 SERTAD4Q9NUC0 356 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 TCL1AP56279 114 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 PLP1P60201 277 aa20.86■□□□□ 0.93
HLA-C-208ENST00000487245 KLF12Q9Y4X4 402 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms