RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ADAP1O75689 374 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 TMEM50AO95807 157 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 IGKV1-17P01599 117 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 APOHP02749 345 aaPredicted RBP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 HOXB5P09067 269 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 RBMY1DP0C7P1 496 aaKnown RBP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 NHLRC4P0CG21 123 aaPredicted RBP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 IAPPP10997 89 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 NPY1RP25929 384 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 HTR2BP41595 481 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 RND2P52198 227 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 SUB1P53999 127 aaKnown RBP eCLIP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 UBE2MP61081 183 aaKnown RBP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 RELQ04864 619 aaPredicted RBP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 DHRS2Q13268 280 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 TIGITQ495A1 244 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 C2orf83Q53S99 150 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 PRSS54Q6PEW0 395 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 TOMM20LQ6UXN7 152 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 DUSP18Q8NEJ0 188 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 OR52B4Q8NGK2 314 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 DTD1Q8TEA8 209 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 MARC2Q969Z3 335 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 OR10C1Q96KK4 312 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 RNF2Q99496 336 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 MAGT1Q9H0U3 335 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 SRD5A3Q9H8P0 318 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 RETNQ9HD89 108 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 GAR1Q9NY12 217 aaKnown RBP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 SMPXQ9UHP9 88 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 PUS1Q9Y606 427 aaKnown RBP eCLIP5.35□□□□□ -1.55
UBE4B-209ENST00000487244 AGRNO00468 2067 aa5.35□□□□□ -1.55
UBE4B-209ENST00000487244 IGHV7-4-1A0A0J9YVY3 117 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 OR11H12B2RN74 326 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 K7EMT4 169 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 CHEK1O14757 476 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 LYRM1O43325 122 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 CLN5O75503 358 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 IFNA10P01566 189 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 OR4E1P0C645 316 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 IGLC1P0CG04 106 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 NPBWR1P48145 328 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 HAGHQ16775 308 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 GGNBP1Q5YKI7 109 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 LINC00322Q6ZN03 302 aaPredicted RBP5.34□□□□□ -1.55
UBE4B-209ENST00000487244 ZNF600Q6ZNG1 722 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.55
UBE4B-209ENST00000487244 SLC16A13Q7RTY0 426 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 LYG2Q86SG7 212 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 LILRB2Q8N423 598 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 TMEM116Q8NCL8 245 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 OR4X1Q8NH49 305 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 ST8SIA2Q92186 375 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 RCHY1Q96PM5 261 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 TM2D3Q9BRN9 247 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 RHPN1-AS1Q9BWJ2 59 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 C20orf85Q9H1P6 137 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 HIPK2Q9H2X6 1198 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 TUBA4BQ9H853 241 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 UBQLN2Q9UHD9 624 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 TBC1D24Q9ULP9 559 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 X6R8D5 127 aa5.34□□□□□ -1.55
UBE4B-209ENST00000487244 IGKV3-7A0A075B6H7 116 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 TRAV6A0A075B6T7 132 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 TRAV14DV4A0A0A6YYC5 116 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 TRAV25A0A0B4J276 109 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 CENPXA8MT69 81 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 TSPAN4O14817 238 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 SLC25A6P12236 298 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 OR10J1P30954 320 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 ODF3L2Q3SX64 289 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 C4orf46Q504U0 113 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 GBGT1Q8N5D6 347 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 RNASEH2CQ8TDP1 164 aaKnown RBP5.33□□□□□ -1.56
UBE4B-209ENST00000487244 NPIPB3Q92617 1050 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 ACY3Q96HD9 319 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 SPAG8Q99932 426 aaPredicted RBP5.33□□□□□ -1.56
UBE4B-209ENST00000487244 FAM110AQ9BQ89 295 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 C7orf50Q9BRJ6 194 aaKnown RBP5.33□□□□□ -1.56
UBE4B-209ENST00000487244 NUDT15Q9NV35 164 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 TMED3Q9Y3Q3 217 aa5.33□□□□□ -1.56
UBE4B-209ENST00000487244 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
UBE4B-209ENST00000487244 IGKV1D-37A0A075B6S9 117 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 RPS10-NUDT3A0A1W2PQS6 291 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 H3BP45 60 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 WRBO00258 174 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 CCSO14618 274 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 TCRBP04435 133 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 IFNA4P05014 189 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 SLC25A4P12235 298 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 HOXA5P20719 270 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 TFPI2P48307 235 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 IFITM3Q01628 133 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
UBE4B-209ENST00000487244 FAM90A2PQ658T7 463 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 OR4D5Q8NGN0 318 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 SEC22CQ9BRL7 303 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 GINS3Q9BRX5 216 aa5.32□□□□□ -1.56
UBE4B-209ENST00000487244 CCDC32Q9BV29 185 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms